Create an index for all KEGG pathway networks
get_all_pathway_net_index(pathway_xml_ls = NULL, org = NULL)
Arguments
- pathway_xml_ls
A list of KEGG pathway XML files, where each element is a `tbl_graph` or `igraph` object.
- org
Character, the KEGG organism code (e.g., "hsa" for human). If `NULL`, uses "ko" as the default prefix for pathway IDs.
Value
A data frame containing indices for all pathways, including pathway IDs and their attributes.