Zi-Pi calculate
Zi-Pi plot of vertexes
zp_analyse(go_m, mode = 2, use_origin = TRUE)
zp_plot(go, label = TRUE, mode = 1)Arguments
- go_m
igraph object after
module_detect()- mode
plot style, 1~3
- use_origin
use original_module, default:TRUE, if FALSE, use module
- go
igraph object after zp_analyse()
- label
show label or not
Value
igraph
a ggplot object
References
Guimerà, R. & Amaral, L. Functional cartography of complex metabolic networks. (2005) doi:10.1038/nature03288.
See also
Other module:
filter_n_module(),
get_community(),
get_module_eigen(),
get_module(),
module_detect(),
module_eigen(),
module_net(),
summary_module(),
to_module_net()
Examples
data("c_net")
module_detect(co_net) -> co_net_modu
zp_analyse(co_net_modu) -> co_net_modu
zp_plot(co_net_modu)
#> Warning: ggrepel: 1 unlabeled data points (too many overlaps). Consider increasing max.overlaps
zp_plot(co_net_modu, mode = 3)
