Annotate a metanet

c_net_annotate(go, anno_tab, mode = "v", verbose = TRUE)

Arguments

go

metanet object

anno_tab

a dataframe using to annotate (mode v, e), or a list (mode n)

mode

"v" for vertex, "e" for edge, "n" for network

verbose

logical

Value

a annotated metanet object

See also

Examples

data("c_net")
anno <- data.frame("name" = "s__Pelomonas_puraquae", new_atr = "new")
co_net_new <- c_net_annotate(co_net, anno, mode = "v")
get_v(co_net_new, c("name", "new_atr"))
#>                                                    name new_atr
#> 1                          s__un_f__Thermomonosporaceae    <NA>
#> 2                                 s__Pelomonas_puraquae     new
#> 3                              s__Rhizobacter_bergeniae    <NA>
#> 4                              s__Flavobacterium_terrae    <NA>
#> 5                                  s__un_g__Rhizobacter    <NA>
#> 6                              s__un_o__Burkholderiales    <NA>
#> 7                                 s__un_g__Streptomyces    <NA>
#> 8                             s__Lentzea_flaviverrucosa    <NA>
#> 9                                 s__un_g__Actinoplanes    <NA>
#> 10                                   s__un_g__Rhizobium    <NA>
#> 11                          s__un_g__Noviherbaspirillum    <NA>
#> 12                              s__un_f__Comamonadaceae    <NA>
#> 13                       s__Bradyrhizobium_neotropicale    <NA>
#> 14                            s__Streptomyces_ederensis    <NA>
#> 15                            s__Actinocorallia_herbida    <NA>
#> 16                               s__un_g__Amycolatopsis    <NA>
#> 17                    s__Actinophytocola_burenkhanensis    <NA>
#> 18                              s__un_p__Proteobacteria    <NA>
#> 19                              s__Kribbella_catacumbae    <NA>
#> 20                                 s__un_o__Rhizobiales    <NA>
#> 21                                s__un_g__Sphingomonas    <NA>
#> 22  s__Amycolatopsis_keratiniphila_subsp._keratiniphila    <NA>
#> 23                         s__Kinneretia_asaccharophila    <NA>
#> 24              s__un_f__Burkholderiales_incertae_sedis    <NA>
#> 25                              s__Kineosporia_rhamnosa    <NA>
#> 26                            s__un_f__Oxalobacteraceae    <NA>
#> 27                                    s__un_g__Bacillus    <NA>
#> 28                     s__Pseudoduganella_violaceinigra    <NA>
#> 29                           s__Piscinibacter_aquaticus    <NA>
#> 30                                     s__un_g__Lentzea    <NA>
#> 31                      s__Steroidobacter_denitrificans    <NA>
#> 32                                 s__Sphingopyxis_soli    <NA>
#> 33                               s__un_g__Herpetosiphon    <NA>
#> 34                         s__Phenylobacterium_composti    <NA>
#> 35                          s__un_f__Micromonosporaceae    <NA>
#> 36                                     s__un_g__Ensifer    <NA>
#> 37                                   s__un_g__Agromyces    <NA>
#> 38                              s__un_g__Flavobacterium    <NA>
#> 39                                s__un_g__Nocardioides    <NA>
#> 40                                     s__un_g__Devosia    <NA>
#> 41                           s__un_f__Bradyrhizobiaceae    <NA>
#> 42                      s__Noviherbaspirillum_suwonense    <NA>
#> 43                         s__un_c__Deltaproteobacteria    <NA>
#> 44           s__Pseudomonas_chlororaphis_subsp._piscium    <NA>
#> 45                   s__Kibdelosporangium_phytohabitans    <NA>
#> 46                                    s__Dongia_mobilis    <NA>
#> 47                                  s__un_g__Variovorax    <NA>
#> 48                                 s__un_g__Pseudomonas    <NA>
#> 49                             s__Pseudoxanthomonas_gei    <NA>
#> 50                            s__un_f__Xanthomonadaceae    <NA>
#> 51                             s__un_o__Actinomycetales    <NA>
#> 52                     s__Pseudoxanthomonas_wuyuanensis    <NA>
#> 53                                    s__un_g__Massilia    <NA>
#> 54                         s__Sandaracinus_amylolyticus    <NA>
#> 55                     s__Steroidobacter_agariperforans    <NA>
#> 56                         s__un_c__Gammaproteobacteria    <NA>
#> 57                             s__Lysobacter_brunescens    <NA>
#> 58                                   s__Devosia_insulae    <NA>
#> 59                          s__un_f__Pseudonocardiaceae    <NA>
#> 60                                 s__Massilia_aerilata    <NA>
#> 61                                s__Nocardioides_albus    <NA>
#> 62                        s__Actinoplanes_xinjiangensis    <NA>
#> 63                              s__un_g__Pseudonocardia    <NA>
#> 64                               s__un_g__Mesorhizobium    <NA>
#> 65                              s__Devosia_chinhatensis    <NA>
#> 66                                s__un_o__Cytophagales    <NA>
#> 67                      s__Phyllobacterium_bourgognense    <NA>
#> 68                               s__un_g__Aquabacterium    <NA>
#> 69                        s__un_f__Streptosporangiaceae    <NA>
#> 70                                   s__un_g__Niastella    <NA>
#> 71                        s__Aeromicrobium_ginsengisoli    <NA>
#> 72                         s__Variovorax_boronicumulans    <NA>
#> 73                           s__Lysobacter_panaciterrae    <NA>
#> 74                            s__Massilia_namucuonensis    <NA>
#> 75                                   s__Rhizobium_alvei    <NA>
#> 76                                 s__un_p__Chloroflexi    <NA>
#> 77                          s__un_g__Altererythrobacter    <NA>
#> 78                                       s__un_g__Bosea    <NA>
#> 79                            s__Hyphomicrobium_vulgare    <NA>
#> 80                          s__Paenibacillus_panacisoli    <NA>
#> 81                              s__un_g__Steroidobacter    <NA>
#> 82                       s__Verrucosispora_andamanensis    <NA>
#> 83                                   s__Reyranella_soli    <NA>
#> 84                              s__un_c__Actinobacteria    <NA>
#> 85                                       s__Bosea_eneae    <NA>
#> 86                            s__un_f__Methylophilaceae    <NA>
#> 87                          s__Nocardioides_agariphilus    <NA>
#> 88                          s__Permianibacter_aggregans    <NA>
#> 89                                 s__Sphingomonas_soli    <NA>
#> 90                              s__Lentzea_jiangxiensis    <NA>
#> 91                                  s__un_g__Hyphomonas    <NA>
#> 92                              s__un_g__Hydrogenophaga    <NA>
#> 93                           s__un_g__Dactylosporangium    <NA>
#> 94                        s__Sphingomonas_daechungensis    <NA>
#> 95                             s__un_f__Kineosporiaceae    <NA>
#> 96                                 s__Lysobacter_terrae    <NA>
#> 97                              s__Caulobacter_henricii    <NA>
#> 98                          s__Saccharothrix_longispora    <NA>
#> 99                   s__Cellvibrio_mixtus_subsp._mixtus    <NA>
#> 100                             s__un_f__Cryomorphaceae    <NA>
#> 101                                   s__un_g__Nocardia    <NA>
#> 102                               s__un_g__Ohtaekwangia    <NA>
#> 103                               s__un_c__Chloroflexia    <NA>
#> 104                   s__Promicromonospora_xylanilytica    <NA>
#> 105                           s__un_g__Phenylobacterium    <NA>
#> 106                          s__Ohtaekwangia_kribbensis    <NA>
#> 107                                  s__Gaiella_occulta    <NA>
#> 108                                 s__un_g__Lysobacter    <NA>
#> 109                           s__Bacillus_thuringiensis    <NA>
#> 110                        s__Streptomyces_acidiscabies    <NA>
#> 111                            s__Polymorphospora_rubra    <NA>
#> 112                               s__un_o__Myxococcales    <NA>
#> 113                             s__Peredibacter_starrii    <NA>
#> 114                            s__un_f__Chloroflexaceae    <NA>
#> 115                                s__un_g__Roseiflexus    <NA>
#> 116                               s__un_g__Burkholderia    <NA>
#> 117                               s__un_g__Arthrobacter    <NA>
#> 118                            s__un_g__Solirubrobacter    <NA>
#> 119                            s__Devosia_yakushimensis    <NA>
#> 120                                    s__Bosea_lathyri    <NA>
#> 121                             s__un_g__Oscillochloris    <NA>
#> 122                            s__Lentzea_kentuckyensis    <NA>
#> 123                             s__Iamia_majanohamensis    <NA>
#> 124                      s__Rhodanobacter_denitrificans    <NA>
#> 125                        s__un_f__Sphingobacteriaceae    <NA>
#> 126                           s__Ilumatobacter_fluminis    <NA>
#> 127                       s__Aeromicrobium_panaciterrae    <NA>
#> 128                        s__un_o__Solirubrobacterales    <NA>
#> 129                          s__un_g__Promicromonospora    <NA>
#> 130                         s__un_c__Betaproteobacteria    <NA>
#> 131                              s__un_g__Aeromicrobium    <NA>
#> 132                          s__un_f__Hyphomicrobiaceae    <NA>
#> 133                             s__Sorangium_cellulosum    <NA>
#> 134                               s__un_f__Rhodobiaceae    <NA>
#> 135                           s__Lysobacter_enzymogenes    <NA>
#> 136                           s__Brevundimonas_basaltis    <NA>
#> 137                         s__Asticcacaulis_solisilvae    <NA>
#> 138                             s__un_g__Micromonospora    <NA>
#> 139                                 s__un_g__Glycomyces    <NA>
#> 140                            s__Aquabacterium_commune    <NA>
#> 141                           s__Caulobacter_fusiformis    <NA>
#> 142                             s__un_g__Hyphomicrobium    <NA>
#> 143                    s__Phyllobacterium_myrsinacearum    <NA>
#> 144                         s__Pedomicrobium_manganicum    <NA>
#> 145                     s__Streptomyces_bangladeshensis    <NA>
#> 146                            s__Rhizobium_subbaraonis    <NA>
#> 147                                 s__un_g__Roseateles    <NA>
#> 148                             s__un_g__Bradyrhizobium    <NA>
#> 149                             s__Inhella_inkyongensis    <NA>
#> 150                   s__Methyloceanibacter_caenitepidi    <NA>
#> 151                          s__Paraherbaspirillum_soli    <NA>
#> 152                           s__un_o__Acidimicrobiales    <NA>
#> 153                                s__Turneriella_parva    <NA>
#> 154                              s__un_g__Mycobacterium    <NA>
#> 155                           s__Mesorhizobium_gobiense    <NA>
#> 156                              s__un_f__Polyangiaceae    <NA>
#> 157                        s__un_c__Alphaproteobacteria    <NA>
#> 158                             s__Conexibacter_arvalis    <NA>
#> 159                               s__un_f__Rhizobiaceae    <NA>
#> 160                                  s__Acidovorax_soli    <NA>
#> 161                     s__Hyphomicrobium_sulfonivorans    <NA>
#> 162                                 s__un_g__Arenimonas    <NA>
#> 163                              s__un_g__Paenibacillus    <NA>
#> 164                                 s__Devosia_pacifica    <NA>
#> 165                               s__Bacillus_abyssalis    <NA>
#> 166                              s__un_g__Pedomicrobium    <NA>
#> 167                             s__Rhizobium_laguerreae    <NA>
#> 168                             s__un_o__Chloroflexales    <NA>
#> 169                          s__un_f__Xanthobacteraceae    <NA>
#> 170                          s__un_f__Sphingomonadaceae    <NA>
#> 171                                s__un_g__Sphingobium    <NA>
#> 172                              s__Rhizocola_hellebori    <NA>
#> 173                          s__Cellvibrio_ostraviensis    <NA>
#> 174                                s__Duganella_radicis    <NA>
#> 175                              s__un_g__Lechevalieria    <NA>
#> 176                                  s__un_g__Geobacter    <NA>
#> 177                         s__un_f__Phyllobacteriaceae    <NA>
#> 178                  s__un_g__Clostridium_sensu_stricto    <NA>
#> 179                          s__un_f__Planctomycetaceae    <NA>
#> 180                                s__un_g__Ramlibacter    <NA>
#> 181                            s__Nocardioides_jensenii    <NA>
#> 182                              s__Planifilum_composti    <NA>
#> 183                              s__un_g__Achromobacter    <NA>
#> 184                            s__Lysobacter_panacisoli    <NA>
#> 185                              s__un_g__Ilumatobacter    <NA>
#> 186           s__Couchioplanes_caeruleus_subsp._azureus    <NA>
#> 187                             s__Shinella_kummerowiae    <NA>
#> 188                          s__Rubrobacter_bracarensis    <NA>
#> 189                         s__Roseiflexus_castenholzii    <NA>
#> 190                          s__Arenimonas_daejeonensis    <NA>
#> 191                                  s__Variovorax_soli    <NA>
#> 192                            s__un_g__Intrasporangium    <NA>
#> 193                               s__Polyangium_fumosum    <NA>
#> 194                              s__un_f__Bacillaceae_1    <NA>
#> 195                         s__un_f__Paenibacillaceae_2    <NA>
#> 196                                       s__un_g__Gp10    <NA>
#> 197                          s__un_f__Rhodospirillaceae    <NA>
#> 198                              s__un_f__Chlamydiaceae    <NA>
#> 199                   s__Sphingosinicella_vermicomposti    <NA>
#> 200                         s__Blastococcus_saxobsidens    <NA>
#> 201                         s__un_f__Paenibacillaceae_1    <NA>
#> 202                            s__un_p__Verrucomicrobia    <NA>
#> 203                            s__Cellulomonas_humilata    <NA>
#> 204                      s__Pseudonocardia_adelaidensis    <NA>
#> 205                         s__Herbaspirillum_aquaticum    <NA>
#> 206       s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 207                         s__un_f__Enterobacteriaceae    <NA>
#> 208                             s__Aquabacterium_parvum    <NA>
#> 209                        s__Ferrovibrio_denitrificans    <NA>
#> 210                                s__Bacillus_infantis    <NA>
#> 211                            s__un_g__Actinophytocola    <NA>
#> 212                                 s__Pseudomonas_soli    <NA>
#> 213                             s__Nocardioides_dilutus    <NA>
#> 214                                  s__un_g__Ralstonia    <NA>
#> 215                         s__Rhizobium_rosettiformans    <NA>
#> 216                         s__Microbacterium_aerolatum    <NA>
#> 217                         s__un_o__Desulfuromonadales    <NA>
#> 218                             s__Paenibacillus_terrae    <NA>
#> 219                            s__un_o__Xanthomonadales    <NA>
#> 220                                        s__un_g__Gp3    <NA>
#> 221                                        s__un_g__Gp6    <NA>
#> 222                     s__Brevundimonas_kwangchunensis    <NA>
#> 223                     s__Pseudonocardia_xinjiangensis    <NA>
#> 224                      s__Solirubrobacter_taibaiensis    <NA>
#> 225                              s__Umezawaea_tangerina    <NA>
#> 226                                 s__un_g__Acidovorax    <NA>
#> 227                            s__Shinella_zoogloeoides    <NA>
#> 228                           s__un_o__Sphingomonadales    <NA>
#> 229                                s__un_g__Vasilyevaea    <NA>
#> 230                               s__un_g__Blastococcus    <NA>
#> 231                          s__Terribacillus_goriensis    <NA>
#> 232                               s__un_g__Conexibacter    <NA>
#> 233                                 s__un_g__Haliangium    <NA>
#> 234                              s__un_g__Saccharothrix    <NA>
#> 235                   s__Rhodopseudomonas_rhenobacensis    <NA>
#> 236                                 s__Rhizobium_vignae    <NA>
#> 237                        s__Cellulosimicrobium_funkei    <NA>
#> 238                              s__un_g__Methylotenera    <NA>
#> 239                                    s__un_g__Pantoea    <NA>
#> 240                             s__un_f__Planococcaceae    <NA>
#> 241                        s__Hyphomicrobium_zavarzinii    <NA>
#> 242                       s__Brevibacillus_ginsengisoli    <NA>
#> 243                          s__Nocardioides_panacisoli    <NA>
#> 244                              s__un_f__Myxococcaceae    <NA>
#> 245                                 s__un_g__Dokdonella    <NA>
#> 246                           s__Blastopirellula_cremea    <NA>
#> 247                       s__Flavobacterium_saliperosum    <NA>
#> 248                            s__un_f__Nocardioidaceae    <NA>
#> 249                                 s__un_c__Clostridia    <NA>
#> 250                          s__Microvirga_guangxiensis    <NA>
#> 251                             s__un_f__Rhodocyclaceae    <NA>
#> 252                               s__un_g__Bdellovibrio    <NA>
#> 253                      s__Mesorhizobium_silamurunense    <NA>
#> 254                                 s__un_o__Bacillales    <NA>
#> 255                  s__Paenisporosarcina_macmurdoensis    <NA>
#> 256                                s__Agromyces_indicus    <NA>
#> 257                        s__Chryseobacterium_defluvii    <NA>
#> 258                           s__Paenibacillus_urinalis    <NA>
#> 259                       s__Chryseobacterium_wanjuense    <NA>
#> 260                                 s__un_g__Microvirga    <NA>
#> 261                        s__Pseudonocardia_seranimata    <NA>
#> 262                                    s__un_g__Cedecea    <NA>
#> 263                                s__un_g__Marmoricola    <NA>
#> 264                                       s__un_g__Gp17    <NA>
#> 265                s__Cryptosporangium_minutisporangium    <NA>
#> 266                             s__un_p__Actinobacteria    <NA>
#> 267                                s__Rhizobium_nepotum    <NA>
#> 268                       s__Mycobacterium_canariasense    <NA>
#> 269                              s__un_g__Fictibacillus    <NA>
#> 270                           s__un_f__Flammeovirgaceae    <NA>
#> 271                            s__un_f__Lachnospiraceae    <NA>
#> 272                              s__Burkholderia_heleia    <NA>
#> 273                         s__Flavobacterium_anhuiense    <NA>
#> 274                              s__Devosia_riboflavina    <NA>
#> 275                             s__Cellulomonas_hominis    <NA>
#> 276                              s__Labilithrix_luteola    <NA>
#> 277                     s__Paenibacillus_pectinilyticus    <NA>
#> 278                                s__un_g__Cystobacter    <NA>
#> 279                      s__Pseudonocardia_kunmingensis    <NA>
#> 280                               s__un_o__Chlamydiales    <NA>
#> 281                              s__Streptomyces_bullii    <NA>
#> 282                             s__Mycobacterium_vaccae    <NA>
#> 283                               s__un_g__Cellulomonas    <NA>
#> 284                               s__Bauldia_consociata    <NA>
#> 285                                 s__un_g__Cellvibrio    <NA>
#> 286                              s__un_g__Luteolibacter    <NA>
#> 287                                s__un_g__Caulobacter    <NA>
#> 288                               s__Bacillus_nealsonii    <NA>
#> 289                            s__un_f__Spirochaetaceae    <NA>
#> 290                              s__un_p__Bacteroidetes    <NA>
#> 291                           s__un_g__Chryseobacterium    <NA>
#> 292                              s__un_g__Brevibacillus    <NA>
#> 293                        s__Brevundimonas_aveniformis    <NA>
#> 294                          s__un_c__Acidobacteria_Gp4    <NA>
#> 295                           s__Arenimonas_oryziterrae    <NA>
#> 296                              s__Marmoricola_scoriae    <NA>
#> 297                           s__Cryobacterium_arcticum    <NA>
#> 298                          s__Nocardioides_daeguensis    <NA>
#> 299                           s__Rudaea_cellulosilytica    <NA>
#> 300                         s__un_f__Intrasporangiaceae    <NA>
#> 301                         s__Duganella_phyllosphaerae    <NA>
#> 302                              s__Nannocystis_exedens    <NA>
#> 303                            s__un_g__Blastopirellula    <NA>
#> 304                               s__un_g__Methylovorus    <NA>
#> 305                               s__Haliangium_tepidum    <NA>
#> 306                            s__un_g__Novosphingobium    <NA>
#> 307                          s__un_f__Flavobacteriaceae    <NA>
#> 308                   s__Altererythrobacter_troitsensis    <NA>
#> 309                        s__Phytohabitans_houttuyneae    <NA>
#> 310                         s__Paenibacillus_prosopidis    <NA>
#> 311                         s__Yonghaparkia_alkaliphila    <NA>
#> 312                          s__un_g__Paenisporosarcina    <NA>
#> 313                              s__un_p__Acidobacteria    <NA>
#> 314                   s__Ammoniibacillus_agariperforans    <NA>
#> 315                         s__Ilumatobacter_nonamiense    <NA>
#> 316                         s__un_o__Sphingobacteriales    <NA>
#> 317                              s__Nonomuraea_salmonea    <NA>
#> 318                          s__Nocardioides_mesophilus    <NA>
#> 319                             s__Phytohabitans_flavus    <NA>
#> 320                        s__Rhizomicrobium_electricum    <NA>
#> 321                    s__Microbacterium_arthrosphaerae    <NA>
#> 322    s__Streptomyces_chrysomallus_subsp._chrysomallus    <NA>
#> 323                        s__Tumebacillus_ginsengisoli    <NA>
#> 324                              s__Nonomuraea_maritima    <NA>
#> 325                           s__Turicibacter_sanguinis    <NA>
#> 326                   s__Uliginosibacterium_gangwonense    <NA>
#> 327                           s__un_f__Cystobacteraceae    <NA>
#> 328                                  s__un_f__Iamiaceae    <NA>
#> 329                           s__un_g__Plantactinospora    <NA>
#> 330                    s__Roseimicrobium_gellanilyticum    <NA>
#> 331         s__un_g__Subdivision3_genera_incertae_sedis    <NA>
#> 332                              s__Cupriavidus_necator    <NA>
#> 333                          s__Nocardioides_caricicola    <NA>
#> 334                       s__Actinophytocola_timorensis    <NA>
#> 335                                   s__Bacillus_horti    <NA>
#> 336                               s__Archangium_gephyra    <NA>
#> 337                          s__un_f__Parachlamydiaceae    <NA>
#> 338                                 s__un_g__Planifilum    <NA>
#> 339                         s__Streptomyces_seranimatus    <NA>
#> 340                    s__Methyloversatilis_universalis    <NA>
#> 341                                       s__un_g__Gp11    <NA>
#> 342                               s__Bacillus_litoralis    <NA>
#> 343                      s__Lechevalieria_xinjiangensis    <NA>
#> 344                          s__un_f__Microbacteriaceae    <NA>
#> 345                                   s__Ensifer_saheli    <NA>
#> 346                       s__un_f__Propionibacteriaceae    <NA>
#> 347                          s__Inquilinus_ginsengisoli    <NA>
#> 348                      s__Flavobacterium_gyeonganense    <NA>
#> 349                    s__Catelliglobosispora_koreensis    <NA>
#> 350                               s__Byssovorax_cruenta    <NA>
#> 351                                   s__un_g__Cohnella    <NA>
#> 352                         s__un_f__Bacteriovoracaceae    <NA>
#> 353                       s__Sporacetigenium_mesophilum    <NA>
#> 354                         s__Azohydromonas_australica    <NA>
#> 355                        s__Nocardioides_iriomotensis    <NA>
#> 356                             s__Xenophilus_aerolatus    <NA>
#> 357                          s__Pseudonocardia_parietis    <NA>
#> 358                           s__Brevundimonas_faecalis    <NA>
#> 359                               s__Bacillus_idriensis    <NA>
#> 360                              s__un_f__Bacillaceae_2    <NA>
#> 361                            s__Bacteriovorax_stolpii    <NA>
#> 362                           s__Nocardioides_terrigena    <NA>
#> 363                            s__Solirubrobacter_pauli    <NA>
#> 364                        s__Paenibacillus_brasilensis    <NA>
#> 365                                s__Bacillus_invictae    <NA>
#> 366                                s__Microvirga_lupini    <NA>
#> 367                                s__Caenimonas_terrae    <NA>
#> 368                           s__un_g__Geodermatophilus    <NA>
#> 369                             s__un_f__Caldilineaceae    <NA>
#> 370                        s__Bradyrhizobium_daqingense    <NA>
#> 371                               s__Arenimonas_metalli    <NA>
#> 372                                       s__un_g__Gp25    <NA>
#> 373                            s__un_f__Sinobacteraceae    <NA>
#> 374                              s__un_g__Brevundimonas    <NA>
#> 375                                   s__un_g__Shinella    <NA>
#> 376                             s__Cystobacter_gracilis    <NA>
#> 377                             s__un_f__Nannocystaceae    <NA>
#> 378                              s__un_g__Angustibacter    <NA>
#> 379                          s__Bacillus_kokeshiiformis    <NA>
#> 380                                 s__un_g__Terrimonas    <NA>
#> 381                           s__Lysobacter_dokdonensis    <NA>
#> 382                           s__un_g__Pseudorhodoferax    <NA>
#> 383                             s__un_p__Planctomycetes    <NA>
#> 384                             s__Rhizobium_rhizoryzae    <NA>
#> 385                               s__un_g__Enterobacter    <NA>
#> 386                                s__un_g__Sporichthya    <NA>
#> 387                                s__un_g__Cupriavidus    <NA>
#> 388                             s__Agromyces_subbeticus    <NA>
#> 389                 s__Mangrovibacterium_diazotrophicum    <NA>
#> 390                         s__Pseudoxanthomonas_indica    <NA>
#> 391                         s__Blastocatella_fastidiosa    <NA>
#> 392                       s__Sphingorhabdus_planktonica    <NA>
#> 393                             s__Nocardia_salmonicida    <NA>
#> 394                               s__un_g__Chitinophaga    <NA>
#> 395                          s__Nonomuraea_muscovyensis    <NA>
#> 396                         s__un_f__Erythrobacteraceae    <NA>
#> 397                         s__Arthrobacter_globiformis    <NA>
#> 398                              s__un_g__Terribacillus    <NA>
#> 399                                s__un_g__Amaricoccus    <NA>
#> 400                                        s__un_g__Gp5    <NA>
#> 401                       s__Phreatobacter_oligotrophus    <NA>
#> 402                            s__un_g__Gracilibacillus    <NA>
#> 403                           s__un_g__Stenotrophomonas    <NA>
#> 404                            s__Marmoricola_aequoreus    <NA>
#> 405                            s__un_g__Planosporangium    <NA>
#> 406                           s__un_o__Rhodospirillales    <NA>
#> 407                        s__un_f__Verrucomicrobiaceae    <NA>
#> 408                              s__Microvirga_aerilata    <NA>
#> 409                    s__Aciditerrimonas_ferrireducens    <NA>
#> 410                                    s__un_g__Bauldia    <NA>
#> 411                             s__un_g__Verrucosispora    <NA>
#> 412                           s__Aridibacter_famidurans    <NA>
#> 413                           s__Rubrivivax_gelatinosus    <NA>
#> 414                              s__Terrimonas_aquatica    <NA>
#> 415                 s__Altererythrobacter_xinjiangensis    <NA>
#> 416                           s__Arenimonas_donghaensis    <NA>
#> 417                                s__un_g__Phycicoccus    <NA>
#> 418                           s__un_f__Chitinophagaceae    <NA>
#> 419                      s__Paenibacillus_barcinonensis    <NA>
#> 420                               s__Starkeya_koreensis    <NA>
#> 421                                        s__un_g__Gp7    <NA>
#> 422                                s__Lysobacter_oryzae    <NA>
#> 423                              s__Nonomuraea_kuesteri    <NA>
#> 424                       s__Nocardioides_marinquilinus    <NA>
#> 425                               s__un_g__Sphingopyxis    <NA>
#> 426                              s__un_g__Methylophilus    <NA>
#> 427                           s__Blastococcus_jejuensis    <NA>
#> 428                             s__un_f__Leptospiraceae    <NA>
#> 429                            s__Schlegelella_aquatica    <NA>
#> 430                         s__Micromonospora_siamensis    <NA>
#> 431                      s__Clostridium_straminisolvens    <NA>
#> 432                          s__Marmoricola_bigeumensis    <NA>
#> 433                               s__Clostridium_roseum    <NA>
#> 434                                 s__un_g__Romboutsia    <NA>
#> 435                              s__Povalibacter_uvarum    <NA>
#> 436                         s__un_f__Gracilibacteraceae    <NA>
#> 437                          s__Reyranella_graminifolii    <NA>
#> 438                             s__Pelagibius_litoralis    <NA>
#> 439                           s__Flavobacterium_hauense    <NA>
#> 440                             s__un_g__Clostridium_XI    <NA>
#> 441                          s__Aggregicoccus_edonensis    <NA>
#> 442                          s__Oligoflexus_tunisiensis    <NA>
#> 443                               s__un_c__Subdivision3    <NA>
#> 444                   s__Flavobacterium_urocaniciphilum    <NA>
#> 445                      s__Parachlamydia_acanthamoebae    <NA>
#> 446                   s__Thioalkalivibrio_sulfidiphilus    <NA>
#> 447                         s__Lacibacter_daechungensis    <NA>
#> 448                             s__Chryseolinea_serpens    <NA>
#> 449                            s__un_f__Sneathiellaceae    <NA>
#> 450                        s__Phenylobacterium_koreense    <NA>
#> 451                         s__Nitrosospira_multiformis    <NA>

anno <- data.frame("from" = "s__Pelomonas_puraquae", "to" = "s__un_g__Rhizobium", new_atr = "new")
co_net_new <- c_net_annotate(co_net, anno, mode = "e")
get_e(co_net_new, c("from", "to", "new_atr"))
#>                                                    from
#> 1                          s__un_f__Thermomonosporaceae
#> 2                          s__un_f__Thermomonosporaceae
#> 3                          s__un_f__Thermomonosporaceae
#> 4                          s__un_f__Thermomonosporaceae
#> 5                                 s__Pelomonas_puraquae
#> 6                                 s__Pelomonas_puraquae
#> 7                                 s__Pelomonas_puraquae
#> 8                                 s__Pelomonas_puraquae
#> 9                                 s__Pelomonas_puraquae
#> 10                                s__Pelomonas_puraquae
#> 11                                s__Pelomonas_puraquae
#> 12                                s__Pelomonas_puraquae
#> 13                                s__Pelomonas_puraquae
#> 14                                s__Pelomonas_puraquae
#> 15                                s__Pelomonas_puraquae
#> 16                                s__Pelomonas_puraquae
#> 17                                s__Pelomonas_puraquae
#> 18                                s__Pelomonas_puraquae
#> 19                                s__Pelomonas_puraquae
#> 20                                s__Pelomonas_puraquae
#> 21                                s__Pelomonas_puraquae
#> 22                                s__Pelomonas_puraquae
#> 23                                s__Pelomonas_puraquae
#> 24                             s__Rhizobacter_bergeniae
#> 25                             s__Rhizobacter_bergeniae
#> 26                             s__Rhizobacter_bergeniae
#> 27                             s__Rhizobacter_bergeniae
#> 28                             s__Rhizobacter_bergeniae
#> 29                             s__Rhizobacter_bergeniae
#> 30                             s__Rhizobacter_bergeniae
#> 31                             s__Flavobacterium_terrae
#> 32                             s__Flavobacterium_terrae
#> 33                             s__Flavobacterium_terrae
#> 34                             s__Flavobacterium_terrae
#> 35                                 s__un_g__Rhizobacter
#> 36                             s__un_o__Burkholderiales
#> 37                             s__un_o__Burkholderiales
#> 38                             s__un_o__Burkholderiales
#> 39                             s__un_o__Burkholderiales
#> 40                             s__un_o__Burkholderiales
#> 41                             s__un_o__Burkholderiales
#> 42                             s__un_o__Burkholderiales
#> 43                             s__un_o__Burkholderiales
#> 44                             s__un_o__Burkholderiales
#> 45                             s__un_o__Burkholderiales
#> 46                             s__un_o__Burkholderiales
#> 47                             s__un_o__Burkholderiales
#> 48                             s__un_o__Burkholderiales
#> 49                             s__un_o__Burkholderiales
#> 50                             s__un_o__Burkholderiales
#> 51                             s__un_o__Burkholderiales
#> 52                             s__un_o__Burkholderiales
#> 53                             s__un_o__Burkholderiales
#> 54                                s__un_g__Streptomyces
#> 55                                s__un_g__Streptomyces
#> 56                                s__un_g__Streptomyces
#> 57                            s__Lentzea_flaviverrucosa
#> 58                            s__Lentzea_flaviverrucosa
#> 59                                s__un_g__Actinoplanes
#> 60                                s__un_g__Actinoplanes
#> 61                                s__un_g__Actinoplanes
#> 62                                   s__un_g__Rhizobium
#> 63                                   s__un_g__Rhizobium
#> 64                                   s__un_g__Rhizobium
#> 65                                   s__un_g__Rhizobium
#> 66                                   s__un_g__Rhizobium
#> 67                                   s__un_g__Rhizobium
#> 68                                   s__un_g__Rhizobium
#> 69                                   s__un_g__Rhizobium
#> 70                                   s__un_g__Rhizobium
#> 71                                   s__un_g__Rhizobium
#> 72                                   s__un_g__Rhizobium
#> 73                                   s__un_g__Rhizobium
#> 74                                   s__un_g__Rhizobium
#> 75                          s__un_g__Noviherbaspirillum
#> 76                          s__un_g__Noviherbaspirillum
#> 77                              s__un_f__Comamonadaceae
#> 78                              s__un_f__Comamonadaceae
#> 79                       s__Bradyrhizobium_neotropicale
#> 80                       s__Bradyrhizobium_neotropicale
#> 81                       s__Bradyrhizobium_neotropicale
#> 82                       s__Bradyrhizobium_neotropicale
#> 83                       s__Bradyrhizobium_neotropicale
#> 84                       s__Bradyrhizobium_neotropicale
#> 85                       s__Bradyrhizobium_neotropicale
#> 86                            s__Streptomyces_ederensis
#> 87                            s__Streptomyces_ederensis
#> 88                            s__Actinocorallia_herbida
#> 89                            s__Actinocorallia_herbida
#> 90                               s__un_g__Amycolatopsis
#> 91                               s__un_g__Amycolatopsis
#> 92                               s__un_g__Amycolatopsis
#> 93                    s__Actinophytocola_burenkhanensis
#> 94                    s__Actinophytocola_burenkhanensis
#> 95                              s__un_p__Proteobacteria
#> 96                              s__un_p__Proteobacteria
#> 97                              s__un_p__Proteobacteria
#> 98                              s__un_p__Proteobacteria
#> 99                              s__un_p__Proteobacteria
#> 100                             s__un_p__Proteobacteria
#> 101                             s__Kribbella_catacumbae
#> 102                             s__Kribbella_catacumbae
#> 103                             s__Kribbella_catacumbae
#> 104                             s__Kribbella_catacumbae
#> 105                             s__Kribbella_catacumbae
#> 106                                s__un_o__Rhizobiales
#> 107                                s__un_o__Rhizobiales
#> 108                                s__un_o__Rhizobiales
#> 109                               s__un_g__Sphingomonas
#> 110                               s__un_g__Sphingomonas
#> 111                               s__un_g__Sphingomonas
#> 112                               s__un_g__Sphingomonas
#> 113                               s__un_g__Sphingomonas
#> 114                               s__un_g__Sphingomonas
#> 115                               s__un_g__Sphingomonas
#> 116                               s__un_g__Sphingomonas
#> 117                               s__un_g__Sphingomonas
#> 118                               s__un_g__Sphingomonas
#> 119 s__Amycolatopsis_keratiniphila_subsp._keratiniphila
#> 120 s__Amycolatopsis_keratiniphila_subsp._keratiniphila
#> 121 s__Amycolatopsis_keratiniphila_subsp._keratiniphila
#> 122                        s__Kinneretia_asaccharophila
#> 123                        s__Kinneretia_asaccharophila
#> 124                        s__Kinneretia_asaccharophila
#> 125                        s__Kinneretia_asaccharophila
#> 126             s__un_f__Burkholderiales_incertae_sedis
#> 127             s__un_f__Burkholderiales_incertae_sedis
#> 128                             s__Kineosporia_rhamnosa
#> 129                           s__un_f__Oxalobacteraceae
#> 130                           s__un_f__Oxalobacteraceae
#> 131                           s__un_f__Oxalobacteraceae
#> 132                                   s__un_g__Bacillus
#> 133                                   s__un_g__Bacillus
#> 134                                   s__un_g__Bacillus
#> 135                                   s__un_g__Bacillus
#> 136                                   s__un_g__Bacillus
#> 137                                   s__un_g__Bacillus
#> 138                                   s__un_g__Bacillus
#> 139                                   s__un_g__Bacillus
#> 140                    s__Pseudoduganella_violaceinigra
#> 141                    s__Pseudoduganella_violaceinigra
#> 142                    s__Pseudoduganella_violaceinigra
#> 143                          s__Piscinibacter_aquaticus
#> 144                          s__Piscinibacter_aquaticus
#> 145                          s__Piscinibacter_aquaticus
#> 146                          s__Piscinibacter_aquaticus
#> 147                                    s__un_g__Lentzea
#> 148                                    s__un_g__Lentzea
#> 149                     s__Steroidobacter_denitrificans
#> 150                     s__Steroidobacter_denitrificans
#> 151                     s__Steroidobacter_denitrificans
#> 152                     s__Steroidobacter_denitrificans
#> 153                     s__Steroidobacter_denitrificans
#> 154                     s__Steroidobacter_denitrificans
#> 155                                s__Sphingopyxis_soli
#> 156                                s__Sphingopyxis_soli
#> 157                                s__Sphingopyxis_soli
#> 158                                s__Sphingopyxis_soli
#> 159                                s__Sphingopyxis_soli
#> 160                                s__Sphingopyxis_soli
#> 161                                s__Sphingopyxis_soli
#> 162                              s__un_g__Herpetosiphon
#> 163                              s__un_g__Herpetosiphon
#> 164                              s__un_g__Herpetosiphon
#> 165                        s__Phenylobacterium_composti
#> 166                        s__Phenylobacterium_composti
#> 167                        s__Phenylobacterium_composti
#> 168                        s__Phenylobacterium_composti
#> 169                        s__Phenylobacterium_composti
#> 170                        s__Phenylobacterium_composti
#> 171                        s__Phenylobacterium_composti
#> 172                        s__Phenylobacterium_composti
#> 173                        s__Phenylobacterium_composti
#> 174                        s__Phenylobacterium_composti
#> 175                         s__un_f__Micromonosporaceae
#> 176                         s__un_f__Micromonosporaceae
#> 177                                    s__un_g__Ensifer
#> 178                                    s__un_g__Ensifer
#> 179                                  s__un_g__Agromyces
#> 180                                  s__un_g__Agromyces
#> 181                                  s__un_g__Agromyces
#> 182                                  s__un_g__Agromyces
#> 183                                  s__un_g__Agromyces
#> 184                                  s__un_g__Agromyces
#> 185                             s__un_g__Flavobacterium
#> 186                             s__un_g__Flavobacterium
#> 187                               s__un_g__Nocardioides
#> 188                                    s__un_g__Devosia
#> 189                                    s__un_g__Devosia
#> 190                                    s__un_g__Devosia
#> 191                                    s__un_g__Devosia
#> 192                                    s__un_g__Devosia
#> 193                                    s__un_g__Devosia
#> 194                                    s__un_g__Devosia
#> 195                                    s__un_g__Devosia
#> 196                                    s__un_g__Devosia
#> 197                                    s__un_g__Devosia
#> 198                                    s__un_g__Devosia
#> 199                          s__un_f__Bradyrhizobiaceae
#> 200                          s__un_f__Bradyrhizobiaceae
#> 201                     s__Noviherbaspirillum_suwonense
#> 202                     s__Noviherbaspirillum_suwonense
#> 203                        s__un_c__Deltaproteobacteria
#> 204                        s__un_c__Deltaproteobacteria
#> 205                        s__un_c__Deltaproteobacteria
#> 206                        s__un_c__Deltaproteobacteria
#> 207                        s__un_c__Deltaproteobacteria
#> 208                        s__un_c__Deltaproteobacteria
#> 209                        s__un_c__Deltaproteobacteria
#> 210                        s__un_c__Deltaproteobacteria
#> 211                        s__un_c__Deltaproteobacteria
#> 212          s__Pseudomonas_chlororaphis_subsp._piscium
#> 213                  s__Kibdelosporangium_phytohabitans
#> 214                                   s__Dongia_mobilis
#> 215                                   s__Dongia_mobilis
#> 216                                   s__Dongia_mobilis
#> 217                                   s__Dongia_mobilis
#> 218                                   s__Dongia_mobilis
#> 219                                   s__Dongia_mobilis
#> 220                                   s__Dongia_mobilis
#> 221                                   s__Dongia_mobilis
#> 222                                   s__Dongia_mobilis
#> 223                                   s__Dongia_mobilis
#> 224                                 s__un_g__Variovorax
#> 225                                 s__un_g__Variovorax
#> 226                                 s__un_g__Variovorax
#> 227                                s__un_g__Pseudomonas
#> 228                                s__un_g__Pseudomonas
#> 229                                s__un_g__Pseudomonas
#> 230                            s__Pseudoxanthomonas_gei
#> 231                            s__Pseudoxanthomonas_gei
#> 232                           s__un_f__Xanthomonadaceae
#> 233                           s__un_f__Xanthomonadaceae
#> 234                            s__un_o__Actinomycetales
#> 235                    s__Pseudoxanthomonas_wuyuanensis
#> 236                                   s__un_g__Massilia
#> 237                                   s__un_g__Massilia
#> 238                                   s__un_g__Massilia
#> 239                        s__Sandaracinus_amylolyticus
#> 240                        s__Sandaracinus_amylolyticus
#> 241                        s__Sandaracinus_amylolyticus
#> 242                        s__Sandaracinus_amylolyticus
#> 243                        s__Sandaracinus_amylolyticus
#> 244                        s__Sandaracinus_amylolyticus
#> 245                    s__Steroidobacter_agariperforans
#> 246                    s__Steroidobacter_agariperforans
#> 247                    s__Steroidobacter_agariperforans
#> 248                    s__Steroidobacter_agariperforans
#> 249                    s__Steroidobacter_agariperforans
#> 250                    s__Steroidobacter_agariperforans
#> 251                    s__Steroidobacter_agariperforans
#> 252                    s__Steroidobacter_agariperforans
#> 253                    s__Steroidobacter_agariperforans
#> 254                        s__un_c__Gammaproteobacteria
#> 255                        s__un_c__Gammaproteobacteria
#> 256                                  s__Devosia_insulae
#> 257                                  s__Devosia_insulae
#> 258                                  s__Devosia_insulae
#> 259                                  s__Devosia_insulae
#> 260                                  s__Devosia_insulae
#> 261                         s__un_f__Pseudonocardiaceae
#> 262                         s__un_f__Pseudonocardiaceae
#> 263                         s__un_f__Pseudonocardiaceae
#> 264                                s__Massilia_aerilata
#> 265                               s__Nocardioides_albus
#> 266                               s__Nocardioides_albus
#> 267                               s__Nocardioides_albus
#> 268                               s__Nocardioides_albus
#> 269                       s__Actinoplanes_xinjiangensis
#> 270                       s__Actinoplanes_xinjiangensis
#> 271                             s__un_g__Pseudonocardia
#> 272                              s__un_g__Mesorhizobium
#> 273                              s__un_g__Mesorhizobium
#> 274                              s__un_g__Mesorhizobium
#> 275                             s__Devosia_chinhatensis
#> 276                             s__Devosia_chinhatensis
#> 277                             s__Devosia_chinhatensis
#> 278                             s__Devosia_chinhatensis
#> 279                               s__un_o__Cytophagales
#> 280                               s__un_o__Cytophagales
#> 281                               s__un_o__Cytophagales
#> 282                               s__un_o__Cytophagales
#> 283                               s__un_o__Cytophagales
#> 284                               s__un_o__Cytophagales
#> 285                               s__un_o__Cytophagales
#> 286                               s__un_o__Cytophagales
#> 287                               s__un_o__Cytophagales
#> 288                               s__un_o__Cytophagales
#> 289                     s__Phyllobacterium_bourgognense
#> 290                     s__Phyllobacterium_bourgognense
#> 291                              s__un_g__Aquabacterium
#> 292                       s__un_f__Streptosporangiaceae
#> 293                                  s__un_g__Niastella
#> 294                                  s__un_g__Niastella
#> 295                                  s__un_g__Niastella
#> 296                                  s__un_g__Niastella
#> 297                                  s__un_g__Niastella
#> 298                                  s__un_g__Niastella
#> 299                                  s__un_g__Niastella
#> 300                                  s__un_g__Niastella
#> 301                                  s__un_g__Niastella
#> 302                       s__Aeromicrobium_ginsengisoli
#> 303                       s__Aeromicrobium_ginsengisoli
#> 304                       s__Aeromicrobium_ginsengisoli
#> 305                       s__Aeromicrobium_ginsengisoli
#> 306                       s__Aeromicrobium_ginsengisoli
#> 307                       s__Aeromicrobium_ginsengisoli
#> 308                       s__Aeromicrobium_ginsengisoli
#> 309                        s__Variovorax_boronicumulans
#> 310                        s__Variovorax_boronicumulans
#> 311                        s__Variovorax_boronicumulans
#> 312                          s__Lysobacter_panaciterrae
#> 313                           s__Massilia_namucuonensis
#> 314                           s__Massilia_namucuonensis
#> 315                           s__Massilia_namucuonensis
#> 316                           s__Massilia_namucuonensis
#> 317                           s__Massilia_namucuonensis
#> 318                           s__Massilia_namucuonensis
#> 319                                  s__Rhizobium_alvei
#> 320                                  s__Rhizobium_alvei
#> 321                                  s__Rhizobium_alvei
#> 322                                s__un_p__Chloroflexi
#> 323                                      s__un_g__Bosea
#> 324                                      s__un_g__Bosea
#> 325                                      s__un_g__Bosea
#> 326                                      s__un_g__Bosea
#> 327                           s__Hyphomicrobium_vulgare
#> 328                           s__Hyphomicrobium_vulgare
#> 329                           s__Hyphomicrobium_vulgare
#> 330                         s__Paenibacillus_panacisoli
#> 331                         s__Paenibacillus_panacisoli
#> 332                             s__un_g__Steroidobacter
#> 333                             s__un_g__Steroidobacter
#> 334                                  s__Reyranella_soli
#> 335                                  s__Reyranella_soli
#> 336                             s__un_c__Actinobacteria
#> 337                             s__un_c__Actinobacteria
#> 338                             s__un_c__Actinobacteria
#> 339                             s__un_c__Actinobacteria
#> 340                                      s__Bosea_eneae
#> 341                                      s__Bosea_eneae
#> 342                         s__Nocardioides_agariphilus
#> 343                         s__Nocardioides_agariphilus
#> 344                         s__Nocardioides_agariphilus
#> 345                         s__Permianibacter_aggregans
#> 346                         s__Permianibacter_aggregans
#> 347                         s__Permianibacter_aggregans
#> 348                                s__Sphingomonas_soli
#> 349                                s__Sphingomonas_soli
#> 350                                s__Sphingomonas_soli
#> 351                                s__Sphingomonas_soli
#> 352                                s__Sphingomonas_soli
#> 353                                s__Sphingomonas_soli
#> 354                             s__Lentzea_jiangxiensis
#> 355                             s__un_g__Hydrogenophaga
#> 356                             s__un_g__Hydrogenophaga
#> 357                             s__un_g__Hydrogenophaga
#> 358                             s__un_g__Hydrogenophaga
#> 359                             s__un_g__Hydrogenophaga
#> 360                          s__un_g__Dactylosporangium
#> 361                          s__un_g__Dactylosporangium
#> 362                          s__un_g__Dactylosporangium
#> 363                       s__Sphingomonas_daechungensis
#> 364                       s__Sphingomonas_daechungensis
#> 365                            s__un_f__Kineosporiaceae
#> 366                                s__Lysobacter_terrae
#> 367                                s__Lysobacter_terrae
#> 368                                s__Lysobacter_terrae
#> 369                             s__Caulobacter_henricii
#> 370                             s__Caulobacter_henricii
#> 371                             s__Caulobacter_henricii
#> 372                             s__Caulobacter_henricii
#> 373                             s__Caulobacter_henricii
#> 374                         s__Saccharothrix_longispora
#> 375                         s__Saccharothrix_longispora
#> 376                         s__Saccharothrix_longispora
#> 377                  s__Cellvibrio_mixtus_subsp._mixtus
#> 378                             s__un_f__Cryomorphaceae
#> 379                             s__un_f__Cryomorphaceae
#> 380                                   s__un_g__Nocardia
#> 381                               s__un_g__Ohtaekwangia
#> 382                               s__un_g__Ohtaekwangia
#> 383                               s__un_g__Ohtaekwangia
#> 384                               s__un_g__Ohtaekwangia
#> 385                               s__un_g__Ohtaekwangia
#> 386                               s__un_c__Chloroflexia
#> 387                               s__un_c__Chloroflexia
#> 388                   s__Promicromonospora_xylanilytica
#> 389                   s__Promicromonospora_xylanilytica
#> 390                           s__un_g__Phenylobacterium
#> 391                           s__un_g__Phenylobacterium
#> 392                           s__un_g__Phenylobacterium
#> 393                           s__un_g__Phenylobacterium
#> 394                           s__un_g__Phenylobacterium
#> 395                          s__Ohtaekwangia_kribbensis
#> 396                                 s__un_g__Lysobacter
#> 397                                 s__un_g__Lysobacter
#> 398                                 s__un_g__Lysobacter
#> 399                                 s__un_g__Lysobacter
#> 400                           s__Bacillus_thuringiensis
#> 401                           s__Bacillus_thuringiensis
#> 402                           s__Bacillus_thuringiensis
#> 403                        s__Streptomyces_acidiscabies
#> 404                        s__Streptomyces_acidiscabies
#> 405                            s__Polymorphospora_rubra
#> 406                            s__Polymorphospora_rubra
#> 407                               s__un_o__Myxococcales
#> 408                             s__Peredibacter_starrii
#> 409                             s__Peredibacter_starrii
#> 410                             s__Peredibacter_starrii
#> 411                             s__Peredibacter_starrii
#> 412                            s__un_f__Chloroflexaceae
#> 413                            s__un_f__Chloroflexaceae
#> 414                            s__un_f__Chloroflexaceae
#> 415                            s__un_f__Chloroflexaceae
#> 416                                s__un_g__Roseiflexus
#> 417                                s__un_g__Roseiflexus
#> 418                                s__un_g__Roseiflexus
#> 419                               s__un_g__Burkholderia
#> 420                               s__un_g__Burkholderia
#> 421                               s__un_g__Arthrobacter
#> 422                               s__un_g__Arthrobacter
#> 423                            s__un_g__Solirubrobacter
#> 424                            s__un_g__Solirubrobacter
#> 425                            s__un_g__Solirubrobacter
#> 426                            s__un_g__Solirubrobacter
#> 427                            s__Devosia_yakushimensis
#> 428                            s__Devosia_yakushimensis
#> 429                                    s__Bosea_lathyri
#> 430                                    s__Bosea_lathyri
#> 431                             s__Iamia_majanohamensis
#> 432                             s__Iamia_majanohamensis
#> 433                             s__Iamia_majanohamensis
#> 434                             s__Iamia_majanohamensis
#> 435                      s__Rhodanobacter_denitrificans
#> 436                      s__Rhodanobacter_denitrificans
#> 437                        s__un_f__Sphingobacteriaceae
#> 438                           s__Ilumatobacter_fluminis
#> 439                           s__Ilumatobacter_fluminis
#> 440                           s__Ilumatobacter_fluminis
#> 441                           s__Ilumatobacter_fluminis
#> 442                           s__Ilumatobacter_fluminis
#> 443                           s__Ilumatobacter_fluminis
#> 444                       s__Aeromicrobium_panaciterrae
#> 445                       s__Aeromicrobium_panaciterrae
#> 446                       s__Aeromicrobium_panaciterrae
#> 447                        s__un_o__Solirubrobacterales
#> 448                        s__un_o__Solirubrobacterales
#> 449                        s__un_o__Solirubrobacterales
#> 450                        s__un_o__Solirubrobacterales
#> 451                        s__un_o__Solirubrobacterales
#> 452                          s__un_g__Promicromonospora
#> 453                          s__un_g__Promicromonospora
#> 454                          s__un_g__Promicromonospora
#> 455                          s__un_g__Promicromonospora
#> 456                         s__un_c__Betaproteobacteria
#> 457                         s__un_c__Betaproteobacteria
#> 458                         s__un_c__Betaproteobacteria
#> 459                              s__un_g__Aeromicrobium
#> 460                          s__un_f__Hyphomicrobiaceae
#> 461                          s__un_f__Hyphomicrobiaceae
#> 462                             s__Sorangium_cellulosum
#> 463                             s__Sorangium_cellulosum
#> 464                               s__un_f__Rhodobiaceae
#> 465                           s__Lysobacter_enzymogenes
#> 466                           s__Brevundimonas_basaltis
#> 467                         s__Asticcacaulis_solisilvae
#> 468                             s__un_g__Micromonospora
#> 469                             s__un_g__Micromonospora
#> 470                             s__un_g__Micromonospora
#> 471                                 s__un_g__Glycomyces
#> 472                                 s__un_g__Glycomyces
#> 473                            s__Aquabacterium_commune
#> 474                           s__Caulobacter_fusiformis
#> 475                             s__un_g__Hyphomicrobium
#> 476                             s__un_g__Hyphomicrobium
#> 477                             s__un_g__Hyphomicrobium
#> 478                    s__Phyllobacterium_myrsinacearum
#> 479                         s__Pedomicrobium_manganicum
#> 480                         s__Pedomicrobium_manganicum
#> 481                         s__Pedomicrobium_manganicum
#> 482                     s__Streptomyces_bangladeshensis
#> 483                     s__Streptomyces_bangladeshensis
#> 484                     s__Streptomyces_bangladeshensis
#> 485                     s__Streptomyces_bangladeshensis
#> 486                            s__Rhizobium_subbaraonis
#> 487                                 s__un_g__Roseateles
#> 488                                 s__un_g__Roseateles
#> 489                             s__un_g__Bradyrhizobium
#> 490                             s__un_g__Bradyrhizobium
#> 491                             s__Inhella_inkyongensis
#> 492                             s__Inhella_inkyongensis
#> 493                   s__Methyloceanibacter_caenitepidi
#> 494                          s__Paraherbaspirillum_soli
#> 495                           s__un_o__Acidimicrobiales
#> 496                           s__un_o__Acidimicrobiales
#> 497                                s__Turneriella_parva
#> 498                              s__un_g__Mycobacterium
#> 499                              s__un_g__Mycobacterium
#> 500                           s__Mesorhizobium_gobiense
#> 501                           s__Mesorhizobium_gobiense
#> 502                             s__Conexibacter_arvalis
#> 503                               s__un_f__Rhizobiaceae
#> 504                               s__un_f__Rhizobiaceae
#> 505                     s__Hyphomicrobium_sulfonivorans
#> 506                     s__Hyphomicrobium_sulfonivorans
#> 507                                 s__un_g__Arenimonas
#> 508                                 s__un_g__Arenimonas
#> 509                              s__un_g__Paenibacillus
#> 510                              s__un_g__Paenibacillus
#> 511                              s__un_g__Paenibacillus
#> 512                                 s__Devosia_pacifica
#> 513                               s__Bacillus_abyssalis
#> 514                              s__un_g__Pedomicrobium
#> 515                              s__un_g__Pedomicrobium
#> 516                             s__Rhizobium_laguerreae
#> 517                             s__un_o__Chloroflexales
#> 518                             s__un_o__Chloroflexales
#> 519                          s__un_f__Xanthobacteraceae
#> 520                          s__un_f__Xanthobacteraceae
#> 521                          s__un_f__Sphingomonadaceae
#> 522                          s__un_f__Sphingomonadaceae
#> 523                              s__Rhizocola_hellebori
#> 524                          s__Cellvibrio_ostraviensis
#> 525                          s__Cellvibrio_ostraviensis
#> 526                                s__Duganella_radicis
#> 527                                  s__un_g__Geobacter
#> 528                         s__un_f__Phyllobacteriaceae
#> 529                         s__un_f__Phyllobacteriaceae
#> 530                         s__un_f__Phyllobacteriaceae
#> 531                  s__un_g__Clostridium_sensu_stricto
#> 532                  s__un_g__Clostridium_sensu_stricto
#> 533                  s__un_g__Clostridium_sensu_stricto
#> 534                  s__un_g__Clostridium_sensu_stricto
#> 535                                s__un_g__Ramlibacter
#> 536                                s__un_g__Ramlibacter
#> 537                            s__Nocardioides_jensenii
#> 538                              s__un_g__Achromobacter
#> 539                              s__un_g__Ilumatobacter
#> 540           s__Couchioplanes_caeruleus_subsp._azureus
#> 541           s__Couchioplanes_caeruleus_subsp._azureus
#> 542                             s__Shinella_kummerowiae
#> 543                          s__Rubrobacter_bracarensis
#> 544                         s__Roseiflexus_castenholzii
#> 545                         s__Roseiflexus_castenholzii
#> 546                          s__Arenimonas_daejeonensis
#> 547                            s__un_g__Intrasporangium
#> 548                            s__un_g__Intrasporangium
#> 549                               s__Polyangium_fumosum
#> 550                               s__Polyangium_fumosum
#> 551                               s__Polyangium_fumosum
#> 552                              s__un_f__Bacillaceae_1
#> 553                              s__un_f__Bacillaceae_1
#> 554                         s__un_f__Paenibacillaceae_2
#> 555                                       s__un_g__Gp10
#> 556                                       s__un_g__Gp10
#> 557                              s__un_f__Chlamydiaceae
#> 558                   s__Sphingosinicella_vermicomposti
#> 559                   s__Sphingosinicella_vermicomposti
#> 560                         s__Blastococcus_saxobsidens
#> 561                         s__Blastococcus_saxobsidens
#> 562                         s__un_f__Paenibacillaceae_1
#> 563                         s__un_f__Paenibacillaceae_1
#> 564                         s__un_f__Paenibacillaceae_1
#> 565                         s__un_f__Paenibacillaceae_1
#> 566                            s__un_p__Verrucomicrobia
#> 567                            s__Cellulomonas_humilata
#> 568                            s__Cellulomonas_humilata
#> 569                      s__Pseudonocardia_adelaidensis
#> 570                      s__Pseudonocardia_adelaidensis
#> 571                      s__Pseudonocardia_adelaidensis
#> 572                      s__Pseudonocardia_adelaidensis
#> 573                         s__Herbaspirillum_aquaticum
#> 574                         s__Herbaspirillum_aquaticum
#> 575       s__un_g__Spartobacteria_genera_incertae_sedis
#> 576       s__un_g__Spartobacteria_genera_incertae_sedis
#> 577       s__un_g__Spartobacteria_genera_incertae_sedis
#> 578                        s__Ferrovibrio_denitrificans
#> 579                        s__Ferrovibrio_denitrificans
#> 580                        s__Ferrovibrio_denitrificans
#> 581                                s__Bacillus_infantis
#> 582                            s__un_g__Actinophytocola
#> 583                            s__un_g__Actinophytocola
#> 584                            s__un_g__Actinophytocola
#> 585                            s__un_g__Actinophytocola
#> 586                            s__un_g__Actinophytocola
#> 587                                 s__Pseudomonas_soli
#> 588                             s__Nocardioides_dilutus
#> 589                                  s__un_g__Ralstonia
#> 590                         s__Microbacterium_aerolatum
#> 591                         s__Microbacterium_aerolatum
#> 592                             s__Paenibacillus_terrae
#> 593                                        s__un_g__Gp3
#> 594                                        s__un_g__Gp6
#> 595                                        s__un_g__Gp6
#> 596                     s__Pseudonocardia_xinjiangensis
#> 597                     s__Pseudonocardia_xinjiangensis
#> 598                      s__Solirubrobacter_taibaiensis
#> 599                              s__Umezawaea_tangerina
#> 600                                 s__un_g__Acidovorax
#> 601                           s__un_o__Sphingomonadales
#> 602                           s__un_o__Sphingomonadales
#> 603                                s__un_g__Vasilyevaea
#> 604                               s__un_g__Blastococcus
#> 605                          s__Terribacillus_goriensis
#> 606                          s__Terribacillus_goriensis
#> 607                          s__Terribacillus_goriensis
#> 608                          s__Terribacillus_goriensis
#> 609                                 s__un_g__Haliangium
#> 610                              s__un_g__Saccharothrix
#> 611                   s__Rhodopseudomonas_rhenobacensis
#> 612                                 s__Rhizobium_vignae
#> 613                                 s__Rhizobium_vignae
#> 614                        s__Cellulosimicrobium_funkei
#> 615                              s__un_g__Methylotenera
#> 616                              s__un_g__Methylotenera
#> 617                                    s__un_g__Pantoea
#> 618                                    s__un_g__Pantoea
#> 619                        s__Hyphomicrobium_zavarzinii
#> 620                       s__Brevibacillus_ginsengisoli
#> 621                          s__Nocardioides_panacisoli
#> 622                              s__un_f__Myxococcaceae
#> 623                              s__un_f__Myxococcaceae
#> 624                           s__Blastopirellula_cremea
#> 625                           s__Blastopirellula_cremea
#> 626                           s__Blastopirellula_cremea
#> 627                       s__Flavobacterium_saliperosum
#> 628                            s__un_f__Nocardioidaceae
#> 629                                 s__un_c__Clostridia
#> 630                          s__Microvirga_guangxiensis
#> 631                             s__un_f__Rhodocyclaceae
#> 632                               s__un_g__Bdellovibrio
#> 633                      s__Mesorhizobium_silamurunense
#> 634                        s__Chryseobacterium_defluvii
#> 635                       s__Chryseobacterium_wanjuense
#> 636                                 s__un_g__Microvirga
#> 637                        s__Pseudonocardia_seranimata
#> 638                                    s__un_g__Cedecea
#> 639                                    s__un_g__Cedecea
#> 640                                    s__un_g__Cedecea
#> 641                s__Cryptosporangium_minutisporangium
#> 642                             s__un_p__Actinobacteria
#> 643                             s__un_p__Actinobacteria
#> 644                                s__Rhizobium_nepotum
#> 645                                s__Rhizobium_nepotum
#> 646                              s__un_g__Fictibacillus
#> 647                           s__un_f__Flammeovirgaceae
#> 648                         s__Flavobacterium_anhuiense
#> 649                              s__Devosia_riboflavina
#> 650                              s__Devosia_riboflavina
#> 651                             s__Cellulomonas_hominis
#> 652                             s__Cellulomonas_hominis
#> 653                     s__Paenibacillus_pectinilyticus
#> 654                                s__un_g__Cystobacter
#> 655                                s__un_g__Cystobacter
#> 656                                s__un_g__Cystobacter
#> 657                               s__un_o__Chlamydiales
#> 658                              s__Streptomyces_bullii
#> 659                              s__Streptomyces_bullii
#> 660                             s__Mycobacterium_vaccae
#> 661                               s__un_g__Cellulomonas
#> 662                               s__un_g__Cellulomonas
#> 663                                 s__un_g__Cellvibrio
#> 664                              s__un_g__Luteolibacter
#> 665                               s__Bacillus_nealsonii
#> 666                               s__Bacillus_nealsonii
#> 667                            s__un_f__Spirochaetaceae
#> 668                              s__un_p__Bacteroidetes
#> 669                              s__un_p__Bacteroidetes
#> 670                              s__un_p__Bacteroidetes
#> 671                           s__Arenimonas_oryziterrae
#> 672                              s__Marmoricola_scoriae
#> 673                              s__Marmoricola_scoriae
#> 674                           s__Cryobacterium_arcticum
#> 675                           s__Rudaea_cellulosilytica
#> 676                           s__Rudaea_cellulosilytica
#> 677                           s__Rudaea_cellulosilytica
#> 678                         s__un_f__Intrasporangiaceae
#> 679                         s__Duganella_phyllosphaerae
#> 680                               s__un_g__Methylovorus
#> 681                               s__un_g__Methylovorus
#> 682                               s__Haliangium_tepidum
#> 683                            s__un_g__Novosphingobium
#> 684                            s__un_g__Novosphingobium
#> 685                          s__un_f__Flavobacteriaceae
#> 686                        s__Phytohabitans_houttuyneae
#> 687                         s__Paenibacillus_prosopidis
#> 688                   s__Ammoniibacillus_agariperforans
#> 689                         s__Ilumatobacter_nonamiense
#> 690                         s__Ilumatobacter_nonamiense
#> 691                          s__Nocardioides_mesophilus
#> 692                             s__Phytohabitans_flavus
#> 693                             s__Phytohabitans_flavus
#> 694                        s__Rhizomicrobium_electricum
#> 695                        s__Rhizomicrobium_electricum
#> 696                    s__Microbacterium_arthrosphaerae
#> 697                        s__Tumebacillus_ginsengisoli
#> 698                           s__Turicibacter_sanguinis
#> 699                   s__Uliginosibacterium_gangwonense
#> 700                           s__un_f__Cystobacteraceae
#> 701                              s__Cupriavidus_necator
#> 702                              s__Cupriavidus_necator
#> 703                              s__Cupriavidus_necator
#> 704                       s__Actinophytocola_timorensis
#> 705                                 s__un_g__Planifilum
#> 706                         s__Streptomyces_seranimatus
#> 707                                   s__Ensifer_saheli
#> 708                      s__Flavobacterium_gyeonganense
#> 709                                   s__un_g__Cohnella
#> 710                         s__un_f__Bacteriovoracaceae
#> 711                       s__Sporacetigenium_mesophilum
#> 712                          s__Pseudonocardia_parietis
#> 713                          s__Pseudonocardia_parietis
#> 714                            s__Bacteriovorax_stolpii
#> 715                            s__Solirubrobacter_pauli
#> 716                        s__Paenibacillus_brasilensis
#> 717                                s__Bacillus_invictae
#> 718                           s__un_g__Geodermatophilus
#> 719                             s__un_f__Caldilineaceae
#> 720                              s__un_g__Brevundimonas
#> 721                                   s__un_g__Shinella
#> 722                             s__un_f__Nannocystaceae
#> 723                             s__un_f__Nannocystaceae
#> 724                           s__Lysobacter_dokdonensis
#> 725                                s__un_g__Sporichthya
#> 726                                s__un_g__Sporichthya
#> 727                 s__Mangrovibacterium_diazotrophicum
#> 728                         s__Blastocatella_fastidiosa
#> 729                             s__Nocardia_salmonicida
#> 730                          s__Nonomuraea_muscovyensis
#> 731                         s__un_f__Erythrobacteraceae
#> 732                              s__un_g__Terribacillus
#> 733                       s__Phreatobacter_oligotrophus
#> 734                            s__un_g__Planosporangium
#> 735                    s__Aciditerrimonas_ferrireducens
#> 736                           s__Arenimonas_donghaensis
#> 737                               s__Starkeya_koreensis
#> 738                           s__Blastococcus_jejuensis
#> 739                             s__un_f__Leptospiraceae
#> 740                             s__Pelagibius_litoralis
#>                                                   to new_atr
#> 1                          s__Actinocorallia_herbida    <NA>
#> 2                            s__Kribbella_catacumbae    <NA>
#> 3                            s__Kineosporia_rhamnosa    <NA>
#> 4                             s__un_g__Angustibacter    <NA>
#> 5                           s__un_o__Burkholderiales    <NA>
#> 6                                 s__un_g__Rhizobium     new
#> 7                            s__un_p__Proteobacteria    <NA>
#> 8                              s__un_g__Sphingomonas    <NA>
#> 9                       s__Phenylobacterium_composti    <NA>
#> 10                                  s__un_g__Devosia    <NA>
#> 11                      s__un_c__Deltaproteobacteria    <NA>
#> 12                                 s__Dongia_mobilis    <NA>
#> 13                                s__Devosia_insulae    <NA>
#> 14                       s__un_f__Pseudonocardiaceae    <NA>
#> 15                              s__Massilia_aerilata    <NA>
#> 16                             s__un_o__Cytophagales    <NA>
#> 17                         s__Massilia_namucuonensis    <NA>
#> 18                         s__Ilumatobacter_fluminis    <NA>
#> 19                              s__Duganella_radicis    <NA>
#> 20                           s__Shinella_kummerowiae    <NA>
#> 21                              s__un_g__Vasilyevaea    <NA>
#> 22                                 s__Ensifer_saheli    <NA>
#> 23                              s__Caenimonas_terrae    <NA>
#> 24                                 s__un_g__Bacillus    <NA>
#> 25                  s__Pseudoduganella_violaceinigra    <NA>
#> 26                        s__Piscinibacter_aquaticus    <NA>
#> 27                       s__Permianibacter_aggregans    <NA>
#> 28                              s__Agromyces_indicus    <NA>
#> 29                     s__Chryseobacterium_wanjuense    <NA>
#> 30                         s__Rubrivivax_gelatinosus    <NA>
#> 31                           s__un_f__Comamonadaceae    <NA>
#> 32                          s__un_g__Solirubrobacter    <NA>
#> 33                         s__un_g__Plantactinospora    <NA>
#> 34                     s__un_f__Propionibacteriaceae    <NA>
#> 35                            s__Burkholderia_heleia    <NA>
#> 36                                s__un_g__Rhizobium    <NA>
#> 37                             s__un_g__Sphingomonas    <NA>
#> 38                      s__Phenylobacterium_composti    <NA>
#> 39                                  s__un_g__Devosia    <NA>
#> 40                      s__un_c__Deltaproteobacteria    <NA>
#> 41                                 s__Dongia_mobilis    <NA>
#> 42                                s__Devosia_insulae    <NA>
#> 43                             s__un_o__Cytophagales    <NA>
#> 44                         s__Massilia_namucuonensis    <NA>
#> 45                              s__Sphingomonas_soli    <NA>
#> 46                              s__Lysobacter_terrae    <NA>
#> 47                          s__Lentzea_kentuckyensis    <NA>
#> 48                         s__Ilumatobacter_fluminis    <NA>
#> 49                              s__Duganella_radicis    <NA>
#> 50     s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 51                               s__Pseudomonas_soli    <NA>
#> 52                                 s__Ensifer_saheli    <NA>
#> 53                              s__Caenimonas_terrae    <NA>
#> 54                     s__Actinoplanes_xinjiangensis    <NA>
#> 55                                s__un_g__Niastella    <NA>
#> 56                           s__un_f__Cryomorphaceae    <NA>
#> 57                         s__Actinocorallia_herbida    <NA>
#> 58                              s__un_g__Amaricoccus    <NA>
#> 59                               s__un_g__Hyphomonas    <NA>
#> 60                                s__Gaiella_occulta    <NA>
#> 61                           s__un_o__Chloroflexales    <NA>
#> 62                             s__un_g__Sphingomonas    <NA>
#> 63                      s__Phenylobacterium_composti    <NA>
#> 64                                  s__un_g__Devosia    <NA>
#> 65                      s__un_c__Deltaproteobacteria    <NA>
#> 66                                 s__Dongia_mobilis    <NA>
#> 67                                s__Devosia_insulae    <NA>
#> 68                       s__un_f__Pseudonocardiaceae    <NA>
#> 69                              s__Massilia_aerilata    <NA>
#> 70                             s__un_o__Cytophagales    <NA>
#> 71                         s__Massilia_namucuonensis    <NA>
#> 72                              s__Lysobacter_terrae    <NA>
#> 73                         s__Mesorhizobium_gobiense    <NA>
#> 74                      s__un_c__Alphaproteobacteria    <NA>
#> 75                   s__Noviherbaspirillum_suwonense    <NA>
#> 76                      s__un_c__Gammaproteobacteria    <NA>
#> 77                          s__Lysobacter_brunescens    <NA>
#> 78                              s__un_g__Marmoricola    <NA>
#> 79                                s__un_g__Niastella    <NA>
#> 80                         s__Hyphomicrobium_vulgare    <NA>
#> 81                           s__un_f__Cryomorphaceae    <NA>
#> 82                                  s__Bosea_lathyri    <NA>
#> 83                            s__un_f__Bacillaceae_1    <NA>
#> 84                                  s__un_g__Pantoea    <NA>
#> 85                      s__Hyphomicrobium_zavarzinii    <NA>
#> 86                          s__un_o__Actinomycetales    <NA>
#> 87                          s__Lysobacter_panacisoli    <NA>
#> 88                            s__un_g__Amycolatopsis    <NA>
#> 89                           s__Kineosporia_rhamnosa    <NA>
#> 90                       s__Nocardioides_agariphilus    <NA>
#> 91                                 s__Ensifer_saheli    <NA>
#> 92                          s__un_g__Planosporangium    <NA>
#> 93                    s__Verrucosispora_andamanensis    <NA>
#> 94                       s__un_c__Betaproteobacteria    <NA>
#> 95                      s__Kinneretia_asaccharophila    <NA>
#> 96                       s__un_f__Pseudonocardiaceae    <NA>
#> 97                           s__un_c__Actinobacteria    <NA>
#> 98                         s__Ilumatobacter_fluminis    <NA>
#> 99                           s__Shinella_kummerowiae    <NA>
#> 100                       s__Nonomuraea_muscovyensis    <NA>
#> 101                          s__Kineosporia_rhamnosa    <NA>
#> 102                      s__un_f__Micromonosporaceae    <NA>
#> 103                         s__un_o__Actinomycetales    <NA>
#> 104                   s__Verrucosispora_andamanensis    <NA>
#> 105              s__Altererythrobacter_xinjiangensis    <NA>
#> 106                         s__Rhizobium_subbaraonis    <NA>
#> 107                s__Altererythrobacter_troitsensis    <NA>
#> 108                          s__Phytohabitans_flavus    <NA>
#> 109                     s__Phenylobacterium_composti    <NA>
#> 110                                s__Dongia_mobilis    <NA>
#> 111                        s__un_f__Xanthomonadaceae    <NA>
#> 112                               s__Devosia_insulae    <NA>
#> 113                            s__un_o__Cytophagales    <NA>
#> 114                             s__Sphingomonas_soli    <NA>
#> 115                             s__Lysobacter_terrae    <NA>
#> 116                          s__Shinella_kummerowiae    <NA>
#> 117                         s__Cellulomonas_humilata    <NA>
#> 118                      s__un_f__Gracilibacteraceae    <NA>
#> 119                                 s__un_g__Lentzea    <NA>
#> 120                        s__Ilumatobacter_fluminis    <NA>
#> 121                              s__Pseudomonas_soli    <NA>
#> 122                      s__un_f__Pseudonocardiaceae    <NA>
#> 123                         s__Cellulomonas_humilata    <NA>
#> 124                            s__Byssovorax_cruenta    <NA>
#> 125                                     s__un_g__Gp5    <NA>
#> 126                        s__un_f__Oxalobacteraceae    <NA>
#> 127                       s__Nocardioides_caricicola    <NA>
#> 128                     s__un_f__Verrucomicrobiaceae    <NA>
#> 129                 s__Pseudoduganella_violaceinigra    <NA>
#> 130                           s__Planifilum_composti    <NA>
#> 131                         s__un_g__Blastopirellula    <NA>
#> 132                     s__un_c__Deltaproteobacteria    <NA>
#> 133                     s__Sandaracinus_amylolyticus    <NA>
#> 134                        s__Bacillus_thuringiensis    <NA>
#> 135                          s__Peredibacter_starrii    <NA>
#> 136                          s__Sorangium_cellulosum    <NA>
#> 137                        s__Mesorhizobium_gobiense    <NA>
#> 138                    s__Chryseobacterium_wanjuense    <NA>
#> 139                            s__un_g__Cellulomonas    <NA>
#> 140                         s__Polymorphospora_rubra    <NA>
#> 141                     s__un_f__Sphingobacteriaceae    <NA>
#> 142                           s__Planifilum_composti    <NA>
#> 143                  s__Noviherbaspirillum_suwonense    <NA>
#> 144                      s__Permianibacter_aggregans    <NA>
#> 145                           s__un_f__Chlamydiaceae    <NA>
#> 146                           s__un_g__Methylotenera    <NA>
#> 147                       s__un_f__Bradyrhizobiaceae    <NA>
#> 148                      s__Rhizobium_rosettiformans    <NA>
#> 149                 s__Steroidobacter_agariperforans    <NA>
#> 150                          s__un_g__Pseudonocardia    <NA>
#> 151                            s__un_g__Ohtaekwangia    <NA>
#> 152                    s__Aeromicrobium_panaciterrae    <NA>
#> 153                           s__un_f__Chlamydiaceae    <NA>
#> 154                         s__un_f__Spirochaetaceae    <NA>
#> 155                     s__un_c__Deltaproteobacteria    <NA>
#> 156                                s__Dongia_mobilis    <NA>
#> 157                                   s__Bosea_eneae    <NA>
#> 158                          s__un_g__Hydrogenophaga    <NA>
#> 159                        s__Ilumatobacter_fluminis    <NA>
#> 160                       s__Arenimonas_daejeonensis    <NA>
#> 161                       s__Bacillus_kokeshiiformis    <NA>
#> 162                    s__Aeromicrobium_ginsengisoli    <NA>
#> 163               s__Paenisporosarcina_macmurdoensis    <NA>
#> 164                            s__Bacillus_idriensis    <NA>
#> 165                                 s__un_g__Devosia    <NA>
#> 166                                s__Dongia_mobilis    <NA>
#> 167                               s__Devosia_insulae    <NA>
#> 168                            s__un_o__Cytophagales    <NA>
#> 169                               s__un_g__Niastella    <NA>
#> 170                        s__Massilia_namucuonensis    <NA>
#> 171                         s__Lentzea_kentuckyensis    <NA>
#> 172                             s__Duganella_radicis    <NA>
#> 173                           s__un_f__Bacillaceae_1    <NA>
#> 174                              s__Pseudomonas_soli    <NA>
#> 175                               s__un_g__Agromyces    <NA>
#> 176                   s__Verrucosispora_andamanensis    <NA>
#> 177                               s__Rhizobium_alvei    <NA>
#> 178                          s__un_g__Oscillochloris    <NA>
#> 179                     s__Variovorax_boronicumulans    <NA>
#> 180                   s__Verrucosispora_andamanensis    <NA>
#> 181                            s__un_g__Arthrobacter    <NA>
#> 182                             s__un_g__Sphingobium    <NA>
#> 183                           s__un_g__Fictibacillus    <NA>
#> 184                        s__un_g__Chryseobacterium    <NA>
#> 185                         s__Lysobacter_panacisoli    <NA>
#> 186               s__Paenisporosarcina_macmurdoensis    <NA>
#> 187                        s__Rudaea_cellulosilytica    <NA>
#> 188                                s__Dongia_mobilis    <NA>
#> 189                               s__Devosia_insulae    <NA>
#> 190                            s__un_o__Cytophagales    <NA>
#> 191                               s__un_g__Niastella    <NA>
#> 192                        s__Massilia_namucuonensis    <NA>
#> 193                          s__un_g__Hydrogenophaga    <NA>
#> 194                          s__un_f__Cryomorphaceae    <NA>
#> 195                        s__Ilumatobacter_fluminis    <NA>
#> 196                    s__Aeromicrobium_panaciterrae    <NA>
#> 197    s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 198                        s__un_f__Chitinophagaceae    <NA>
#> 199                        s__Paenibacillus_urinalis    <NA>
#> 200                             s__un_g__Caulobacter    <NA>
#> 201                           s__un_g__Methylotenera    <NA>
#> 202                           s__un_g__Brevibacillus    <NA>
#> 203                                s__Dongia_mobilis    <NA>
#> 204                      s__un_f__Pseudonocardiaceae    <NA>
#> 205                      s__un_g__Altererythrobacter    <NA>
#> 206                                   s__un_g__Bosea    <NA>
#> 207               s__Cellvibrio_mixtus_subsp._mixtus    <NA>
#> 208                        s__Ilumatobacter_fluminis    <NA>
#> 209                    s__Chryseobacterium_wanjuense    <NA>
#> 210                            s__Byssovorax_cruenta    <NA>
#> 211                          s__un_f__Caldilineaceae    <NA>
#> 212                               s__un_g__Geobacter    <NA>
#> 213                 s__Phyllobacterium_myrsinacearum    <NA>
#> 214                               s__Devosia_insulae    <NA>
#> 215                            s__un_o__Cytophagales    <NA>
#> 216                        s__Massilia_namucuonensis    <NA>
#> 217                             s__Sphingomonas_soli    <NA>
#> 218                       s__un_g__Dactylosporangium    <NA>
#> 219                             s__Lysobacter_terrae    <NA>
#> 220                        s__Ilumatobacter_fluminis    <NA>
#> 221    s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 222                    s__Chryseobacterium_wanjuense    <NA>
#> 223                             s__Caenimonas_terrae    <NA>
#> 224                          s__Rhizobium_laguerreae    <NA>
#> 225                     s__Rhizomicrobium_electricum    <NA>
#> 226                          s__Chryseolinea_serpens    <NA>
#> 227                 s__Pseudoxanthomonas_wuyuanensis    <NA>
#> 228                              s__un_g__Glycomyces    <NA>
#> 229                              s__un_g__Arenimonas    <NA>
#> 230              s__Altererythrobacter_xinjiangensis    <NA>
#> 231                       s__Oligoflexus_tunisiensis    <NA>
#> 232                               s__Devosia_insulae    <NA>
#> 233                      s__un_f__Gracilibacteraceae    <NA>
#> 234                           s__Povalibacter_uvarum    <NA>
#> 235                       s__Arenimonas_daejeonensis    <NA>
#> 236                             s__Massilia_aerilata    <NA>
#> 237                            s__un_g__Ohtaekwangia    <NA>
#> 238                             s__un_g__Phycicoccus    <NA>
#> 239                             s__Lysobacter_terrae    <NA>
#> 240                        s__Bacillus_thuringiensis    <NA>
#> 241                          s__Peredibacter_starrii    <NA>
#> 242                         s__un_g__Solirubrobacter    <NA>
#> 243                        s__Mesorhizobium_gobiense    <NA>
#> 244                    s__Chryseobacterium_wanjuense    <NA>
#> 245                          s__un_g__Hydrogenophaga    <NA>
#> 246                            s__un_g__Ohtaekwangia    <NA>
#> 247                    s__Aeromicrobium_panaciterrae    <NA>
#> 248                          s__un_g__Hyphomicrobium    <NA>
#> 249                        s__un_o__Acidimicrobiales    <NA>
#> 250                           s__un_f__Polyangiaceae    <NA>
#> 251                                    s__un_g__Gp17    <NA>
#> 252              s__Altererythrobacter_xinjiangensis    <NA>
#> 253                        s__Flavobacterium_hauense    <NA>
#> 254                        s__un_f__Methylophilaceae    <NA>
#> 255                          s__un_f__Planococcaceae    <NA>
#> 256                            s__un_o__Cytophagales    <NA>
#> 257                        s__Massilia_namucuonensis    <NA>
#> 258                             s__Sphingomonas_soli    <NA>
#> 259                           s__un_f__Bacillaceae_1    <NA>
#> 260                      s__un_f__Gracilibacteraceae    <NA>
#> 261                             s__Massilia_aerilata    <NA>
#> 262                          s__un_c__Actinobacteria    <NA>
#> 263                         s__un_p__Verrucomicrobia    <NA>
#> 264                        s__Massilia_namucuonensis    <NA>
#> 265                            s__Bacillus_abyssalis    <NA>
#> 266                       s__un_f__Sphingomonadaceae    <NA>
#> 267                              s__un_c__Clostridia    <NA>
#> 268 s__Streptomyces_chrysomallus_subsp._chrysomallus    <NA>
#> 269                     s__un_c__Alphaproteobacteria    <NA>
#> 270                       s__Inquilinus_ginsengisoli    <NA>
#> 271                         s__un_f__Spirochaetaceae    <NA>
#> 272                       s__Ohtaekwangia_kribbensis    <NA>
#> 273                        s__Blastopirellula_cremea    <NA>
#> 274                           s__un_g__Brevibacillus    <NA>
#> 275                            s__un_f__Rhodobiaceae    <NA>
#> 276                        s__Caulobacter_fusiformis    <NA>
#> 277    s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 278                     s__Ferrovibrio_denitrificans    <NA>
#> 279                               s__un_g__Niastella    <NA>
#> 280                        s__Massilia_namucuonensis    <NA>
#> 281                             s__Sphingomonas_soli    <NA>
#> 282                            s__un_g__Ohtaekwangia    <NA>
#> 283                        s__Ilumatobacter_fluminis    <NA>
#> 284                     s__un_c__Alphaproteobacteria    <NA>
#> 285                             s__Duganella_radicis    <NA>
#> 286    s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 287                             s__Caenimonas_terrae    <NA>
#> 288                      s__un_f__Gracilibacteraceae    <NA>
#> 289                       s__un_f__Rhodospirillaceae    <NA>
#> 290                              s__un_g__Dokdonella    <NA>
#> 291                        s__Blastococcus_jejuensis    <NA>
#> 292                              s__Rhizobium_vignae    <NA>
#> 293                               s__Rhizobium_alvei    <NA>
#> 294                          s__un_f__Cryomorphaceae    <NA>
#> 295                            s__un_g__Ohtaekwangia    <NA>
#> 296                                 s__Bosea_lathyri    <NA>
#> 297                    s__Aeromicrobium_panaciterrae    <NA>
#> 298                          s__un_g__Hyphomicrobium    <NA>
#> 299                     s__un_c__Alphaproteobacteria    <NA>
#> 300    s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 301                      s__Yonghaparkia_alkaliphila    <NA>
#> 302                    s__Sphingomonas_daechungensis    <NA>
#> 303                            s__un_g__Ohtaekwangia    <NA>
#> 304                          s__Nocardioides_dilutus    <NA>
#> 305                         s__Shinella_zoogloeoides    <NA>
#> 306                           s__Streptomyces_bullii    <NA>
#> 307                            s__Bacillus_litoralis    <NA>
#> 308                   s__Lechevalieria_xinjiangensis    <NA>
#> 309                           s__un_g__Fictibacillus    <NA>
#> 310                           s__Povalibacter_uvarum    <NA>
#> 311                          s__Chryseolinea_serpens    <NA>
#> 312                    s__Mycobacterium_canariasense    <NA>
#> 313                          s__un_c__Actinobacteria    <NA>
#> 314                             s__Sphingomonas_soli    <NA>
#> 315                        s__Ilumatobacter_fluminis    <NA>
#> 316                             s__Duganella_radicis    <NA>
#> 317    s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 318                             s__Caenimonas_terrae    <NA>
#> 319                                   s__Bosea_eneae    <NA>
#> 320                     s__Pseudonocardia_seranimata    <NA>
#> 321                           s__Nannocystis_exedens    <NA>
#> 322                           s__un_g__Luteolibacter    <NA>
#> 323                  s__Streptomyces_bangladeshensis    <NA>
#> 324                          s__Nocardioides_dilutus    <NA>
#> 325                        s__Brevundimonas_faecalis    <NA>
#> 326                          s__un_f__Caldilineaceae    <NA>
#> 327                                 s__Bosea_lathyri    <NA>
#> 328                      s__Roseiflexus_castenholzii    <NA>
#> 329                              s__un_c__Clostridia    <NA>
#> 330                          s__Inhella_inkyongensis    <NA>
#> 331                   s__Clostridium_straminisolvens    <NA>
#> 332                             s__un_g__Sphingobium    <NA>
#> 333                              s__un_g__Acidovorax    <NA>
#> 334                           s__un_g__Ilumatobacter    <NA>
#> 335                        s__un_g__Plantactinospora    <NA>
#> 336                          s__un_g__Micromonospora    <NA>
#> 337                          s__un_o__Chloroflexales    <NA>
#> 338                             s__Duganella_radicis    <NA>
#> 339                        s__Arenimonas_oryziterrae    <NA>
#> 340                     s__Cellulosimicrobium_funkei    <NA>
#> 341                       s__Bacillus_kokeshiiformis    <NA>
#> 342                        s__Ilumatobacter_fluminis    <NA>
#> 343                             s__Duganella_radicis    <NA>
#> 344                            s__un_c__Subdivision3    <NA>
#> 345                           s__Planifilum_composti    <NA>
#> 346                          s__Nocardia_salmonicida    <NA>
#> 347                         s__Schlegelella_aquatica    <NA>
#> 348                       s__un_g__Dactylosporangium    <NA>
#> 349    s__un_g__Spartobacteria_genera_incertae_sedis    <NA>
#> 350                              s__Rhizobium_vignae    <NA>
#> 351             s__Cryptosporangium_minutisporangium    <NA>
#> 352                             s__Caenimonas_terrae    <NA>
#> 353                      s__un_f__Gracilibacteraceae    <NA>
#> 354                              s__un_g__Haliangium    <NA>
#> 355                      s__Saccharothrix_longispora    <NA>
#> 356                    s__Aeromicrobium_panaciterrae    <NA>
#> 357                        s__un_o__Acidimicrobiales    <NA>
#> 358                       s__Arenimonas_daejeonensis    <NA>
#> 359                           s__Nonomuraea_maritima    <NA>
#> 360                                    s__un_g__Gp10    <NA>
#> 361                      s__Ilumatobacter_nonamiense    <NA>
#> 362                      s__Arthrobacter_globiformis    <NA>
#> 363                            s__un_g__Ohtaekwangia    <NA>
#> 364                     s__un_o__Solirubrobacterales    <NA>
#> 365                             s__Lysobacter_terrae    <NA>
#> 366                        s__Mesorhizobium_gobiense    <NA>
#> 367                    s__Chryseobacterium_wanjuense    <NA>
#> 368                        s__un_g__Stenotrophomonas    <NA>
#> 369                  s__Brevundimonas_kwangchunensis    <NA>
#> 370                           s__un_g__Saccharothrix    <NA>
#> 371                       s__Pseudonocardia_parietis    <NA>
#> 372                     s__Bradyrhizobium_daqingense    <NA>
#> 373                             s__un_g__Amaricoccus    <NA>
#> 374                    s__Flavobacterium_saliperosum    <NA>
#> 375                        s__un_o__Rhodospirillales    <NA>
#> 376                          s__un_g__Verrucosispora    <NA>
#> 377                           s__un_g__Brevibacillus    <NA>
#> 378                             s__Turneriella_parva    <NA>
#> 379                           s__un_f__Bacillaceae_1    <NA>
#> 380                          s__Iamia_majanohamensis    <NA>
#> 381                    s__Aeromicrobium_panaciterrae    <NA>
#> 382                     s__un_o__Solirubrobacterales    <NA>
#> 383                        s__Brevundimonas_basaltis    <NA>
#> 384                          s__un_g__Hyphomicrobium    <NA>
#> 385                     s__un_c__Alphaproteobacteria    <NA>
#> 386                            s__Bacillus_idriensis    <NA>
#> 387                              s__un_g__Romboutsia    <NA>
#> 388                          s__Nocardioides_dilutus    <NA>
#> 389                           s__Umezawaea_tangerina    <NA>
#> 390                       s__un_f__Hyphomicrobiaceae    <NA>
#> 391                  s__Pseudonocardia_xinjiangensis    <NA>
#> 392                         s__Shinella_zoogloeoides    <NA>
#> 393                       s__un_c__Acidobacteria_Gp4    <NA>
#> 394                    s__Nocardioides_marinquilinus    <NA>
#> 395                          s__Mycobacterium_vaccae    <NA>
#> 396                      s__Herbaspirillum_aquaticum    <NA>
#> 397                      s__Blastocatella_fastidiosa    <NA>
#> 398                           s__un_g__Terribacillus    <NA>
#> 399                    s__Nocardioides_marinquilinus    <NA>
#> 400                          s__un_g__Bradyrhizobium    <NA>
#> 401                        s__Mesorhizobium_gobiense    <NA>
#> 402                      s__un_f__Intrasporangiaceae    <NA>
#> 403                         s__Rhizobium_subbaraonis    <NA>
#> 404                       s__un_f__Flavobacteriaceae    <NA>
#> 405                           s__Nonomuraea_salmonea    <NA>
#> 406                           s__Terrimonas_aquatica    <NA>
#> 407                         s__Schlegelella_aquatica    <NA>
#> 408                        s__Mesorhizobium_gobiense    <NA>
#> 409                       s__un_f__Xanthobacteraceae    <NA>
#> 410                             s__un_g__Cystobacter    <NA>
#> 411                        s__un_o__Rhodospirillales    <NA>
#> 412                   s__Pseudonocardia_adelaidensis    <NA>
#> 413                             s__Bacillus_infantis    <NA>
#> 414                           s__un_g__Methylotenera    <NA>
#> 415                 s__Microbacterium_arthrosphaerae    <NA>
#> 416                     s__Ferrovibrio_denitrificans    <NA>
#> 417                                    s__un_g__Gp11    <NA>
#> 418                      s__Micromonospora_siamensis    <NA>
#> 419                    s__Sphingorhabdus_planktonica    <NA>
#> 420                   s__Paenibacillus_barcinonensis    <NA>
#> 421                       s__un_f__Planctomycetaceae    <NA>
#> 422                           s__un_f__Bacillaceae_2    <NA>
#> 423                         s__Devosia_yakushimensis    <NA>
#> 424                        s__un_g__Plantactinospora    <NA>
#> 425                          s__Cystobacter_gracilis    <NA>
#> 426                            s__Starkeya_koreensis    <NA>
#> 427                           s__un_f__Polyangiaceae    <NA>
#> 428                        s__un_f__Chitinophagaceae    <NA>
#> 429                        s__Blastopirellula_cremea    <NA>
#> 430                            s__Byssovorax_cruenta    <NA>
#> 431                           s__un_g__Lechevalieria    <NA>
#> 432                      s__un_f__Paenibacillaceae_2    <NA>
#> 433                      s__Duganella_phyllosphaerae    <NA>
#> 434                       s__un_f__Microbacteriaceae    <NA>
#> 435                           s__Planifilum_composti    <NA>
#> 436                s__Ammoniibacillus_agariperforans    <NA>
#> 437                          s__un_g__Clostridium_XI    <NA>
#> 438                    s__Aeromicrobium_panaciterrae    <NA>
#> 439                             s__Duganella_radicis    <NA>
#> 440                             s__un_g__Vasilyevaea    <NA>
#> 441                                s__Ensifer_saheli    <NA>
#> 442                          s__un_f__Caldilineaceae    <NA>
#> 443                        s__un_f__Chitinophagaceae    <NA>
#> 444                        s__Brevundimonas_basaltis    <NA>
#> 445                          s__un_g__Hyphomicrobium    <NA>
#> 446                        s__un_o__Acidimicrobiales    <NA>
#> 447                              s__un_g__Roseateles    <NA>
#> 448                         s__Shinella_zoogloeoides    <NA>
#> 449                           s__Streptomyces_bullii    <NA>
#> 450                      s__Duganella_phyllosphaerae    <NA>
#> 451                       s__un_g__Paenisporosarcina    <NA>
#> 452                         s__un_o__Xanthomonadales    <NA>
#> 453                            s__un_g__Blastococcus    <NA>
#> 454                    s__Mycobacterium_canariasense    <NA>
#> 455                        s__Arenimonas_donghaensis    <NA>
#> 456                                 s__un_g__Pantoea    <NA>
#> 457                           s__Burkholderia_heleia    <NA>
#> 458                   s__Flavobacterium_gyeonganense    <NA>
#> 459                             s__Caenimonas_terrae    <NA>
#> 460                       s__un_c__Acidobacteria_Gp4    <NA>
#> 461                        s__un_g__Geodermatophilus    <NA>
#> 462        s__Couchioplanes_caeruleus_subsp._azureus    <NA>
#> 463                             s__un_g__Cystobacter    <NA>
#> 464                                    s__un_g__Gp10    <NA>
#> 465                      s__un_o__Desulfuromonadales    <NA>
#> 466                                s__Ensifer_saheli    <NA>
#> 467                      s__un_f__Erythrobacteraceae    <NA>
#> 468                              s__un_g__Haliangium    <NA>
#> 469                        s__Arenimonas_oryziterrae    <NA>
#> 470                       s__Nocardioides_daeguensis    <NA>
#> 471                         s__Lysobacter_panacisoli    <NA>
#> 472                           s__Devosia_riboflavina    <NA>
#> 473                               s__Variovorax_soli    <NA>
#> 474                        s__Paenibacillus_urinalis    <NA>
#> 475                                    s__un_g__Gp17    <NA>
#> 476                           s__Streptomyces_bullii    <NA>
#> 477                       s__un_g__Paenisporosarcina    <NA>
#> 478                            s__un_g__Enterobacter    <NA>
#> 479                       s__Arenimonas_daejeonensis    <NA>
#> 480                                s__un_g__Shinella    <NA>
#> 481                        s__un_g__Stenotrophomonas    <NA>
#> 482                    s__Chryseobacterium_wanjuense    <NA>
#> 483                            s__Bacillus_litoralis    <NA>
#> 484                                s__un_g__Cohnella    <NA>
#> 485                s__Thioalkalivibrio_sulfidiphilus    <NA>
#> 486                        s__un_g__Geodermatophilus    <NA>
#> 487                       s__un_f__Microbacteriaceae    <NA>
#> 488                        s__un_g__Pseudorhodoferax    <NA>
#> 489                              s__un_c__Clostridia    <NA>
#> 490                      s__Pseudoxanthomonas_indica    <NA>
#> 491                               s__Acidovorax_soli    <NA>
#> 492                   s__Pseudonocardia_kunmingensis    <NA>
#> 493                       s__Cellvibrio_ostraviensis    <NA>
#> 494                                s__Bacillus_horti    <NA>
#> 495                           s__un_f__Chlamydiaceae    <NA>
#> 496                             s__un_g__Cupriavidus    <NA>
#> 497                               s__un_g__Ralstonia    <NA>
#> 498                           s__un_g__Lechevalieria    <NA>
#> 499                        s__Nocardioides_terrigena    <NA>
#> 500                            s__Bacillus_abyssalis    <NA>
#> 501                       s__un_f__Planctomycetaceae    <NA>
#> 502                s__Sphingosinicella_vermicomposti    <NA>
#> 503                             s__un_g__Amaricoccus    <NA>
#> 504                      s__Nitrosospira_multiformis    <NA>
#> 505                        s__un_o__Sphingomonadales    <NA>
#> 506                         s__Solirubrobacter_pauli    <NA>
#> 507                            s__Polyangium_fumosum    <NA>
#> 508                  s__Paenibacillus_pectinilyticus    <NA>
#> 509                              s__un_o__Bacillales    <NA>
#> 510                        s__un_f__Flammeovirgaceae    <NA>
#> 511                        s__Nocardioides_terrigena    <NA>
#> 512                       s__un_f__Planctomycetaceae    <NA>
#> 513                      s__un_f__Erythrobacteraceae    <NA>
#> 514                            s__un_g__Cellulomonas    <NA>
#> 515                        s__un_g__Stenotrophomonas    <NA>
#> 516                              s__un_g__Microvirga    <NA>
#> 517                                    s__un_g__Gp10    <NA>
#> 518                           s__Labilithrix_luteola    <NA>
#> 519        s__Couchioplanes_caeruleus_subsp._azureus    <NA>
#> 520                        s__un_o__Rhodospirillales    <NA>
#> 521                              s__un_c__Clostridia    <NA>
#> 522                              s__un_o__Bacillales    <NA>
#> 523                            s__Starkeya_koreensis    <NA>
#> 524      s__un_g__Subdivision3_genera_incertae_sedis    <NA>
#> 525                             s__Microvirga_lupini    <NA>
#> 526                             s__Caenimonas_terrae    <NA>
#> 527                       s__un_f__Planctomycetaceae    <NA>
#> 528                      s__un_f__Enterobacteriaceae    <NA>
#> 529 s__Streptomyces_chrysomallus_subsp._chrysomallus    <NA>
#> 530                            s__Starkeya_koreensis    <NA>
#> 531                           s__un_g__Ilumatobacter    <NA>
#> 532                           s__un_g__Luteolibacter    <NA>
#> 533                       s__Reyranella_graminifolii    <NA>
#> 534                s__Flavobacterium_urocaniciphilum    <NA>
#> 535                          s__Aquabacterium_parvum    <NA>
#> 536                       s__un_f__Parachlamydiaceae    <NA>
#> 537                           s__un_g__Ilumatobacter    <NA>
#> 538                   s__Lechevalieria_xinjiangensis    <NA>
#> 539                              s__un_g__Cellvibrio    <NA>
#> 540                           s__un_p__Acidobacteria    <NA>
#> 541                             s__Bacillus_invictae    <NA>
#> 542                       s__Nonomuraea_muscovyensis    <NA>
#> 543                        s__Paenibacillus_urinalis    <NA>
#> 544                              s__un_g__Microvirga    <NA>
#> 545                           s__un_g__Luteolibacter    <NA>
#> 546                    s__Flavobacterium_saliperosum    <NA>
#> 547                          s__un_f__Caldilineaceae    <NA>
#> 548                        s__un_f__Chitinophagaceae    <NA>
#> 549                                 s__un_g__Cedecea    <NA>
#> 550                      s__Paenibacillus_prosopidis    <NA>
#> 551                 s__Roseimicrobium_gellanilyticum    <NA>
#> 552                        s__un_f__Flammeovirgaceae    <NA>
#> 553                      s__un_f__Gracilibacteraceae    <NA>
#> 554                             s__Microvirga_lupini    <NA>
#> 555                          s__un_f__Rhodocyclaceae    <NA>
#> 556      s__un_g__Subdivision3_genera_incertae_sedis    <NA>
#> 557                          s__un_f__Leptospiraceae    <NA>
#> 558                        s__un_g__Plantactinospora    <NA>
#> 559                          s__Rhizobium_rhizoryzae    <NA>
#> 560                      s__un_f__Enterobacteriaceae    <NA>
#> 561                                s__un_g__Cohnella    <NA>
#> 562                        s__un_o__Sphingomonadales    <NA>
#> 563                          s__un_f__Planococcaceae    <NA>
#> 564                    s__Sporacetigenium_mesophilum    <NA>
#> 565                            s__un_g__Enterobacter    <NA>
#> 566                             s__Agromyces_indicus    <NA>
#> 567                         s__Shinella_zoogloeoides    <NA>
#> 568                                     s__un_g__Gp5    <NA>
#> 569                       s__Terribacillus_goriensis    <NA>
#> 570                           s__un_g__Methylotenera    <NA>
#> 571                 s__Aciditerrimonas_ferrireducens    <NA>
#> 572                          s__un_g__Clostridium_XI    <NA>
#> 573                          s__un_f__Nannocystaceae    <NA>
#> 574                      s__Blastocatella_fastidiosa    <NA>
#> 575                       s__un_f__Microbacteriaceae    <NA>
#> 576                             s__Caenimonas_terrae    <NA>
#> 577                        s__Flavobacterium_hauense    <NA>
#> 578                   s__Mesorhizobium_silamurunense    <NA>
#> 579                                    s__un_g__Gp11    <NA>
#> 580                        s__Aridibacter_famidurans    <NA>
#> 581                           s__un_g__Methylotenera    <NA>
#> 582                      s__Paenibacillus_prosopidis    <NA>
#> 583                                 s__un_g__Bauldia    <NA>
#> 584                        s__Arenimonas_donghaensis    <NA>
#> 585                           s__Povalibacter_uvarum    <NA>
#> 586                      s__un_f__Gracilibacteraceae    <NA>
#> 587                      s__Lacibacter_daechungensis    <NA>
#> 588                       s__un_g__Paenisporosarcina    <NA>
#> 589                       s__Nocardioides_mesophilus    <NA>
#> 590                     s__Brevundimonas_aveniformis    <NA>
#> 591                           s__un_g__Brevundimonas    <NA>
#> 592                             s__un_g__Cystobacter    <NA>
#> 593                                s__Bacillus_horti    <NA>
#> 594                           s__Marmoricola_scoriae    <NA>
#> 595                                s__Ensifer_saheli    <NA>
#> 596                            s__Archangium_gephyra    <NA>
#> 597                    s__Nocardioides_marinquilinus    <NA>
#> 598                            s__un_g__Conexibacter    <NA>
#> 599                        s__un_g__Chryseobacterium    <NA>
#> 600                             s__un_g__Marmoricola    <NA>
#> 601                           s__un_f__Myxococcaceae    <NA>
#> 602                            s__Bauldia_consociata    <NA>
#> 603                                s__Ensifer_saheli    <NA>
#> 604             s__Cryptosporangium_minutisporangium    <NA>
#> 605                           s__Streptomyces_bullii    <NA>
#> 606                       s__un_g__Paenisporosarcina    <NA>
#> 607                      s__un_f__Bacteriovoracaceae    <NA>
#> 608                        s__un_g__Stenotrophomonas    <NA>
#> 609                                    s__un_g__Gp25    <NA>
#> 610                              s__un_g__Dokdonella    <NA>
#> 611                 s__Methyloversatilis_universalis    <NA>
#> 612              s__Altererythrobacter_xinjiangensis    <NA>
#> 613                      s__un_f__Gracilibacteraceae    <NA>
#> 614                                s__un_g__Shinella    <NA>
#> 615                       s__un_f__Microbacteriaceae    <NA>
#> 616                 s__Aciditerrimonas_ferrireducens    <NA>
#> 617                            s__un_g__Methylovorus    <NA>
#> 618                            s__Archangium_gephyra    <NA>
#> 619                         s__Marmoricola_aequoreus    <NA>
#> 620                           s__un_f__Myxococcaceae    <NA>
#> 621                       s__Bacillus_kokeshiiformis    <NA>
#> 622                           s__un_p__Acidobacteria    <NA>
#> 623                          s__Xenophilus_aerolatus    <NA>
#> 624                           s__Streptomyces_bullii    <NA>
#> 625                       s__un_g__Paenisporosarcina    <NA>
#> 626                   s__Lechevalieria_xinjiangensis    <NA>
#> 627                               s__un_f__Iamiaceae    <NA>
#> 628                     s__Bradyrhizobium_daqingense    <NA>
#> 629 s__Streptomyces_chrysomallus_subsp._chrysomallus    <NA>
#> 630                                     s__un_g__Gp7    <NA>
#> 631      s__un_g__Subdivision3_genera_incertae_sedis    <NA>
#> 632                                    s__un_g__Gp25    <NA>
#> 633                         s__un_f__Lachnospiraceae    <NA>
#> 634                          s__un_f__Caldilineaceae    <NA>
#> 635                            s__un_g__Cellulomonas    <NA>
#> 636                s__Flavobacterium_urocaniciphilum    <NA>
#> 637                           s__Nannocystis_exedens    <NA>
#> 638                     s__Brevundimonas_aveniformis    <NA>
#> 639                      s__un_o__Sphingobacteriales    <NA>
#> 640                      s__un_f__Erythrobacteraceae    <NA>
#> 641                        s__un_g__Pseudorhodoferax    <NA>
#> 642                         s__un_f__Lachnospiraceae    <NA>
#> 643                       s__Aggregicoccus_edonensis    <NA>
#> 644                        s__un_f__Cystobacteraceae    <NA>
#> 645                         s__un_g__Gracilibacillus    <NA>
#> 646                        s__un_g__Chryseobacterium    <NA>
#> 647                     s__Brevundimonas_aveniformis    <NA>
#> 648                    s__Sphingorhabdus_planktonica    <NA>
#> 649                      s__Streptomyces_seranimatus    <NA>
#> 650                            s__Arenimonas_metalli    <NA>
#> 651                 s__Catelliglobosispora_koreensis    <NA>
#> 652                      s__Azohydromonas_australica    <NA>
#> 653                     s__Tumebacillus_ginsengisoli    <NA>
#> 654                           s__un_g__Luteolibacter    <NA>
#> 655                        s__un_o__Rhodospirillales    <NA>
#> 656                s__Flavobacterium_urocaniciphilum    <NA>
#> 657                           s__un_g__Methylophilus    <NA>
#> 658                       s__un_g__Paenisporosarcina    <NA>
#> 659                        s__Arenimonas_donghaensis    <NA>
#> 660                           s__un_g__Brevibacillus    <NA>
#> 661                           s__un_g__Angustibacter    <NA>
#> 662                s__Thioalkalivibrio_sulfidiphilus    <NA>
#> 663                        s__Aridibacter_famidurans    <NA>
#> 664                s__Flavobacterium_urocaniciphilum    <NA>
#> 665                           s__un_g__Angustibacter    <NA>
#> 666                            s__Starkeya_koreensis    <NA>
#> 667                     s__Brevundimonas_aveniformis    <NA>
#> 668                      s__Paenibacillus_prosopidis    <NA>
#> 669                               s__un_f__Iamiaceae    <NA>
#> 670                                s__un_g__Cohnella    <NA>
#> 671                       s__Nocardioides_daeguensis    <NA>
#> 672                s__Thioalkalivibrio_sulfidiphilus    <NA>
#> 673                     s__Phenylobacterium_koreense    <NA>
#> 674                 s__Microbacterium_arthrosphaerae    <NA>
#> 675                       s__Nonomuraea_muscovyensis    <NA>
#> 676                         s__un_g__Planosporangium    <NA>
#> 677                       s__Aggregicoccus_edonensis    <NA>
#> 678                        s__un_o__Rhodospirillales    <NA>
#> 679                        s__Lysobacter_dokdonensis    <NA>
#> 680                          s__un_p__Planctomycetes    <NA>
#> 681                                     s__un_g__Gp5    <NA>
#> 682                             s__Microvirga_lupini    <NA>
#> 683                    s__Phreatobacter_oligotrophus    <NA>
#> 684                             s__un_g__Phycicoccus    <NA>
#> 685                 s__Microbacterium_arthrosphaerae    <NA>
#> 686                       s__Marmoricola_bigeumensis    <NA>
#> 687                        s__Arenimonas_donghaensis    <NA>
#> 688                       s__un_f__Parachlamydiaceae    <NA>
#> 689                                s__un_g__Shinella    <NA>
#> 690                              s__un_g__Terrimonas    <NA>
#> 691                           s__Nonomuraea_kuesteri    <NA>
#> 692                              s__un_g__Planifilum    <NA>
#> 693                           s__un_f__Bacillaceae_2    <NA>
#> 694                      s__un_f__Bacteriovoracaceae    <NA>
#> 695                     s__Paenibacillus_brasilensis    <NA>
#> 696                     s__Nocardioides_iriomotensis    <NA>
#> 697                 s__Methyloversatilis_universalis    <NA>
#> 698                   s__Clostridium_straminisolvens    <NA>
#> 699                       s__un_f__Parachlamydiaceae    <NA>
#> 700                         s__un_g__Gracilibacillus    <NA>
#> 701                       s__un_f__Microbacteriaceae    <NA>
#> 702                        s__Lysobacter_dokdonensis    <NA>
#> 703                                     s__un_g__Gp7    <NA>
#> 704                            s__un_g__Sphingopyxis    <NA>
#> 705                          s__un_g__Clostridium_XI    <NA>
#> 706                            s__un_g__Enterobacter    <NA>
#> 707                             s__Caenimonas_terrae    <NA>
#> 708                    s__Phreatobacter_oligotrophus    <NA>
#> 709                         s__un_f__Sinobacteraceae    <NA>
#> 710                     s__un_f__Verrucomicrobiaceae    <NA>
#> 711                          s__Agromyces_subbeticus    <NA>
#> 712                             s__un_g__Amaricoccus    <NA>
#> 713                         s__Marmoricola_aequoreus    <NA>
#> 714                                s__un_g__Shinella    <NA>
#> 715                             s__Lysobacter_oryzae    <NA>
#> 716                      s__Arthrobacter_globiformis    <NA>
#> 717                           s__Microvirga_aerilata    <NA>
#> 718                          s__un_g__Verrucosispora    <NA>
#> 719                      s__Nitrosospira_multiformis    <NA>
#> 720              s__Mangrovibacterium_diazotrophicum    <NA>
#> 721                        s__un_g__Stenotrophomonas    <NA>
#> 722                      s__Blastocatella_fastidiosa    <NA>
#> 723                           s__Terrimonas_aquatica    <NA>
#> 724                        s__un_g__Pseudorhodoferax    <NA>
#> 725                      s__Blastocatella_fastidiosa    <NA>
#> 726                      s__Micromonospora_siamensis    <NA>
#> 727                            s__un_g__Chitinophaga    <NA>
#> 728                        s__Rubrivivax_gelatinosus    <NA>
#> 729                         s__Schlegelella_aquatica    <NA>
#> 730                                     s__un_g__Gp7    <NA>
#> 731                     s__un_f__Verrucomicrobiaceae    <NA>
#> 732                    s__Nocardioides_marinquilinus    <NA>
#> 733                             s__un_g__Phycicoccus    <NA>
#> 734                   s__Parachlamydia_acanthamoebae    <NA>
#> 735                          s__un_g__Clostridium_XI    <NA>
#> 736                            s__Clostridium_roseum    <NA>
#> 737                    s__Nocardioides_marinquilinus    <NA>
#> 738                       s__Reyranella_graminifolii    <NA>
#> 739                      s__Micromonospora_siamensis    <NA>
#> 740                         s__un_f__Sneathiellaceae    <NA>

co_net_new <- c_net_annotate(co_net, list(new_atr = "new"), mode = "n")
get_n(co_net_new)
#>   n_type new_atr
#> 1 single     new